RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 PRKAA1Q13131 559 aa8.21□□□□□ -1.1
NANOG-201ENST00000229307 ART3Q13508 389 aa8.21□□□□□ -1.1
NANOG-201ENST00000229307 CCNG2Q16589 344 aa8.21□□□□□ -1.1
NANOG-201ENST00000229307 E4F1Q66K89 784 aaPredicted RBP8.21□□□□□ -1.1
NANOG-201ENST00000229307 KCTD16Q68DU8 428 aa8.21□□□□□ -1.1
NANOG-201ENST00000229307 FAM183BPQ6ZVS7 135 aa8.21□□□□□ -1.1
NANOG-201ENST00000229307 MTSS1LQ765P7 747 aa8.21□□□□□ -1.1
NANOG-201ENST00000229307 SZRD1Q7Z422 152 aa8.21□□□□□ -1.1
NANOG-201ENST00000229307 PHF13Q86YI8 300 aaPredicted RBP8.21□□□□□ -1.1
NANOG-201ENST00000229307 CHPFQ8IZ52 775 aa8.21□□□□□ -1.1
NANOG-201ENST00000229307 GIMAP7Q8NHV1 300 aa8.21□□□□□ -1.1
NANOG-201ENST00000229307 ZDHHC6Q9H6R6 413 aa8.21□□□□□ -1.1
NANOG-201ENST00000229307 ZDHHC4Q9NPG8 344 aa8.21□□□□□ -1.1
NANOG-201ENST00000229307 MRGBPQ9NV56 204 aa8.21□□□□□ -1.1
NANOG-201ENST00000229307 HBS1LQ9Y450 684 aaKnown RBP8.21□□□□□ -1.1
NANOG-201ENST00000229307 APOA4P06727 396 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 ZNF865P0CJ78 1059 aaPredicted RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 GAD2Q05329 585 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 GRSF1Q12849 480 aaKnown RBP eCLIP8.2□□□□□ -1.1
NANOG-201ENST00000229307 TAF10Q12962 218 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 CAMK2GQ13555 558 aaPredicted RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 SETMARQ53H47 684 aaPredicted RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 TAPT1Q6NXT6 567 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 LRRC55Q6ZSA7 311 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 NUDCD3Q8IVD9 361 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 CMTR2Q8IYT2 770 aaKnown RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 CCDC197Q8NCU1 140 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 PLD4Q96BZ4 506 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 BTBD6Q96KE9 485 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 NLNQ9BYT8 704 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 TRIM55Q9BYV6 548 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 DUS2Q9NX74 493 aaKnown RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 FAM153AQ9UHL3 310 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 APOBEC2Q9Y235 224 aaKnown RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 A0A1W2PQ67 120 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 SUPT3HB4E1H0 165 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 NRP1O14786 923 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 TGFB1I1O43294 461 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 SUPT3HO75486 399 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 CLDN11O75508 207 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 HTR1BP28222 390 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 MATKP42679 507 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 MTHFRP42898 656 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 NPY2RP49146 381 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 CDH17Q12864 832 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 ITGA9Q13797 1035 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 C2CD6Q53TS8 623 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 ADAM32Q8TC27 787 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 SHC3Q92529 594 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 BTN2A3PQ96KV6 586 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 SERPINI1Q99574 410 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 SYTL2Q9HCH5 934 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 CASS4Q9NQ75 786 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 PSMC3IPQ9P2W1 217 aaPredicted RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 IRS2Q9Y4H2 1338 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 KANSL1LA0AUZ9 987 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 DYRK3O43781 588 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 PIGRP01833 764 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 NCF2P19878 526 aaPredicted RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 FSHRP23945 695 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 PRKCIP41743 596 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 FAM83EQ2M2I3 478 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 IRAK1BP1Q5VVH5 260 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 LCLAT1Q6UWP7 414 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 AHCYL2Q96HN2 611 aaKnown RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 CELF6Q96J87 481 aaKnown RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 FGD4Q96M96 766 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 EFHD1Q9BUP0 239 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 MRPL40Q9NQ50 206 aaKnown RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 PHF24Q9UPV7 400 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 BAZ2BQ9UIF8 2168 aaKnown RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 ANKRD36CQ5JPF3 1778 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 WDR91A4D1P6 747 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 TIMM44O43615 452 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 MAGEC1O60732 1142 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 ATG7O95352 703 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 OR56A5P0C7T3 313 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 ZNF7P17097 686 aaPredicted RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 KELP23276 732 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 EDNRBP24530 442 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 LRRC38Q5VT99 294 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 WDR59Q6PJI9 974 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 SERINC5Q86VE9 423 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 SUGP1Q8IWZ8 645 aaKnown RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 RIBC1Q8N443 379 aaPredicted RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 HTR3CQ8WXA8 447 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 G3BP2Q9UN86 482 aaKnown RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 SMG5Q9UPR3 1016 aaKnown RBP8.2□□□□□ -1.1
NANOG-201ENST00000229307 DYRK1BQ9Y463 629 aa8.2□□□□□ -1.1
NANOG-201ENST00000229307 CILPO75339 1184 aa8.19□□□□□ -1.1
NANOG-201ENST00000229307 TADA3O75528 432 aa8.19□□□□□ -1.1
NANOG-201ENST00000229307 ERVK-10P10266 1014 aa8.19□□□□□ -1.1
NANOG-201ENST00000229307 SP100P23497 879 aaPredicted RBP8.19□□□□□ -1.1
NANOG-201ENST00000229307 MIPP30301 263 aa8.19□□□□□ -1.1
NANOG-201ENST00000229307 LILRA4P59901 499 aa8.19□□□□□ -1.1
NANOG-201ENST00000229307 CCZ1BP86790 482 aa8.19□□□□□ -1.1
NANOG-201ENST00000229307 CCZ1P86791 482 aaPredicted RBP8.19□□□□□ -1.1
NANOG-201ENST00000229307 MAPRE2Q15555 327 aa8.19□□□□□ -1.1
NANOG-201ENST00000229307 EPS8L1Q8TE68 723 aa8.19□□□□□ -1.1
NANOG-201ENST00000229307 MS4A4AQ96JQ5 239 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms