RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 GBP7Q8N8V2 638 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 SMOQ99835 787 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 TBC1D10AQ9BXI6 508 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 MCOLN1Q9GZU1 580 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 C10orf88Q9H8K7 445 aa12.11□□□□□ -0.47
TNFAIP1-201ENST00000226225 A0A0G2JND7 137 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 H7C0C1 242 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 PSTPIP1O43586 416 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 MTA2O94776 668 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 HMBSP08397 361 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 ZCCHC18P0CG32 403 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 TFE3P19532 575 aaPredicted RBP12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 ATP5OP48047 213 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 PEX5P50542 639 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 HADHBP55084 474 aaKnown RBP12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 HFE2Q6ZVN8 426 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 ZNF354CQ86Y25 554 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 ANKLE1Q8NAG6 615 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 LRRN4Q8WUT4 740 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 CKAP2Q8WWK9 683 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 PHTF1Q9UMS5 762 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 CFAP69A5D8W1 941 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 YJEFN3A6XGL0 299 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 E7ENQ6 273 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 GAS8O95995 478 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 CD48P09326 243 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 SPATA31D3P0C874 917 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 MMRN1Q13201 1228 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 SEPT7Q16181 437 aaKnown RBP12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 NFE2Q16621 373 aaPredicted RBP12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 GALNTL6Q49A17 601 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 TAF1BQ53T94 588 aaPredicted RBP12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 ZC3H12AQ5D1E8 599 aaKnown RBP12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 SPATA31D4Q6ZUB0 917 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 TMEM110Q86TL2 294 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 NETO2Q8NC67 525 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 MAIP1Q8WWC4 291 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 DNAJC9Q8WXX5 260 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 MCRS1Q96EZ8 462 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 CASD1Q96PB1 797 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 TTPALQ9BTX7 342 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 VPS37BQ9H9H4 285 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 RNPEPL1Q9HAU8 725 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 C2orf71A6NGG8 1288 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 GABRDO14764 452 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 PARNO95453 639 aaKnown RBP12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 CA4P22748 312 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 ITGB8P26012 769 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 IL1R2P27930 398 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 FAM189BP81408 668 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 MRPS5P82675 430 aaKnown RBP12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 ARHGEF18Q6ZSZ5 1173 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 GPRIN1Q7Z2K8 1008 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 MIB1Q86YT6 1006 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 BADQ92934 168 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 TBCBQ99426 244 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 SLC4A5Q9BY07 1137 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 TXLNGQ9NUQ3 528 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 ETAA1Q9NY74 926 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 PCDHB5Q9Y5E4 795 aa12.1□□□□□ -0.47
TNFAIP1-201ENST00000226225 TRIM43BA6NCK2 446 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 SRGAP2BP0DMP2 458 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 ATF2P15336 505 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 ARL4AP40617 200 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 GPR15P49685 360 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 IL9RQ01113 521 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 ZBTB16Q05516 673 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 ZNF252P-AS1Q0IIN9 211 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 CLUL1Q15846 466 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 TSNAXIP1Q2TAA8 658 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 PPP1R15BQ5SWA1 713 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 SYCP2LQ5T4T6 812 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 RSAD2Q8WXG1 361 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 TRIM43Q96BQ3 446 aaPredicted RBP12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 RUNDC3BQ96NL0 473 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 TRIM4Q9C037 500 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 DDX56Q9NY93 547 aaKnown RBP12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 TBX21Q9UL17 535 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 CHKBQ9Y259 395 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 C2CD4BA6NLJ0 364 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 CALB2P22676 271 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 RANBP1P43487 201 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 CCDC14Q49A88 953 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 SYPL2Q5VXT5 272 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 RWDD4Q6NW29 188 aaKnown RBP12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 OLFML1Q6UWY5 402 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 SPOCD1Q6ZMY3 1216 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 TAS1R1Q7RTX1 841 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 CCDC89Q8N998 374 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 EXD1Q8NHP7 514 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 ZNF558Q96NG5 402 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 CYTH2Q99418 400 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 DENND2DQ9H6A0 471 aaPredicted RBP12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 CYP4F11Q9HBI6 524 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 EXOC1LA0A1B0GW35 172 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 PRRG1O14668 218 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 PEX11AO75192 247 aa12.09□□□□□ -0.47
TNFAIP1-201ENST00000226225 TIMP1P01033 207 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms