RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 BRD2P25440 801 aaKnown RBP18.77■□□□□ 0.6
PFN1-201ENST00000225655 DPP6P42658 865 aa18.77■□□□□ 0.6
PFN1-201ENST00000225655 PTGER3P43115 390 aa18.77■□□□□ 0.6
PFN1-201ENST00000225655 ZNF75DP51815 510 aa18.77■□□□□ 0.6
PFN1-201ENST00000225655 TRIP4Q15650 581 aaPredicted RBP18.77■□□□□ 0.6
PFN1-201ENST00000225655 MEA1Q16626 185 aa18.77■□□□□ 0.6
PFN1-201ENST00000225655 TSR1Q2NL82 804 aaKnown RBP18.77■□□□□ 0.6
PFN1-201ENST00000225655 SFMBT2Q5VUG0 894 aa18.77■□□□□ 0.6
PFN1-201ENST00000225655 KIAA1211LQ6NV74 962 aa18.77■□□□□ 0.6
PFN1-201ENST00000225655 LCLAT1Q6UWP7 414 aa18.77■□□□□ 0.6
PFN1-201ENST00000225655 DENND1CQ8IV53 801 aa18.77■□□□□ 0.6
PFN1-201ENST00000225655 SIX6OS1Q8N1H7 587 aa18.77■□□□□ 0.6
PFN1-201ENST00000225655 SCML4Q8N228 414 aa18.77■□□□□ 0.6
PFN1-201ENST00000225655 UBA3Q8TBC4 463 aa18.77■□□□□ 0.6
PFN1-201ENST00000225655 IPO4Q8TEX9 1081 aaKnown RBP18.77■□□□□ 0.6
PFN1-201ENST00000225655 NDRG1Q92597 394 aaKnown RBP18.77■□□□□ 0.6
PFN1-201ENST00000225655 EVLQ9UI08 416 aaPredicted RBP18.77■□□□□ 0.6
PFN1-201ENST00000225655 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.77■□□□□ 0.6
PFN1-201ENST00000225655 GOLGA6L6A8MZA4 724 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 M0QYV0 167 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 AP5Z1O43299 807 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 CYBBP04839 570 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 ZBED6P86452 979 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 ASIC2Q16515 512 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 BSPRYQ5W0U4 402 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 SLC36A4Q6YBV0 504 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 ZNF677Q86XU0 584 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 SYT12Q8IV01 421 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 TFAP2BQ92481 460 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 NOX5Q96PH1 765 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 CNGB3Q9NQW8 809 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 CAPN11Q9UMQ6 739 aa18.76■□□□□ 0.59
PFN1-201ENST00000225655 HBS1LQ9Y450 684 aaKnown RBP18.76■□□□□ 0.59
PFN1-201ENST00000225655 TPRP12270 2363 aaKnown RBP18.76■□□□□ 0.59
PFN1-201ENST00000225655 LRRC53A6NM62 1247 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 YJEFN3A6XGL0 299 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 C4orf47A7E2U8 309 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 PATE3B3GLJ2 98 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 E7ENQ6 273 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 NPC1O15118 1278 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 ZNF217O75362 1048 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 PNMA6AP0CW24 399 aaPredicted RBP18.75■□□□□ 0.59
PFN1-201ENST00000225655 CYP11B1P15538 503 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 NDUFV2P19404 249 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 KCNA4P22459 653 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 HOXD12P35452 270 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 CLCN1P35523 988 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 HARS2P49590 506 aaKnown RBP18.75■□□□□ 0.59
PFN1-201ENST00000225655 SNX16P57768 344 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 IRX4P78413 519 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 ARID5AQ03989 594 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 LYSMD4Q5XG99 296 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 ARMCX6Q7L4S7 300 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 SLC47A2Q86VL8 602 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 DRC7Q8IY82 874 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 RNF139Q8WU17 664 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 SLC35F5Q8WV83 523 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 CPLX3Q8WVH0 158 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 ZNF606Q8WXB4 792 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 PIWIL1Q96J94 861 aaKnown RBP18.75■□□□□ 0.59
PFN1-201ENST00000225655 CNTNAP3BQ96NU0 1288 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 SLC2A11Q9BYW1 496 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 CNTNAP3Q9BZ76 1288 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 ABCC13Q9NSE7 274 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 ZNHIT6Q9NWK9 470 aaKnown RBP18.75■□□□□ 0.59
PFN1-201ENST00000225655 CACNA2D2Q9NY47 1150 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 PILRBQ9UKJ0 227 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 STON1Q9Y6Q2 735 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 ACACBO00763 2458 aa18.75■□□□□ 0.59
PFN1-201ENST00000225655 IGHV1OR15-9A0A0B4J2B8 117 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 RPL6Q02878 288 aaKnown RBP18.74■□□□□ 0.59
PFN1-201ENST00000225655 LMAN2Q12907 356 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 ENPP2Q13822 863 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 E2F5Q15329 346 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 GEN1Q17RS7 908 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 TRIM61Q5EBN2 209 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 DAB2IPQ5VWQ8 1189 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 PEAR1Q5VY43 1037 aaPredicted RBP18.74■□□□□ 0.59
PFN1-201ENST00000225655 TMC6Q7Z403 805 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 ANKS1BQ7Z6G8 1248 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 DDI1Q8WTU0 396 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 UCMAQ8WVF2 138 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 BAP1Q92560 729 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 EDEM1Q92611 657 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 ANP32BQ92688 251 aaKnown RBP18.74■□□□□ 0.59
PFN1-201ENST00000225655 SYN2Q92777 582 aaPredicted RBP18.74■□□□□ 0.59
PFN1-201ENST00000225655 MRGPRX1Q96LB2 322 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 ZSWIM1Q9BR11 485 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 TTYH3Q9C0H2 523 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 TMEM9BQ9NQ34 198 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 TMEM74BQ9NUR3 256 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 THAP10Q9P2Z0 257 aaPredicted RBP18.74■□□□□ 0.59
PFN1-201ENST00000225655 STOML2Q9UJZ1 356 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 RAD54BQ9Y620 910 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 PI4KAP42356 2102 aa18.74■□□□□ 0.59
PFN1-201ENST00000225655 GON4LQ3T8J9 2241 aa18.73■□□□□ 0.59
PFN1-201ENST00000225655 WASH3PC4AMC7 463 aa18.73■□□□□ 0.59
PFN1-201ENST00000225655 CDX4O14627 284 aaPredicted RBP18.73■□□□□ 0.59
PFN1-201ENST00000225655 GABBR2O75899 941 aa18.73■□□□□ 0.59
PFN1-201ENST00000225655 KCNK5O95279 499 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms