RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 EBNA1BP2Q99848 306 aaKnown RBP13.96□□□□□ -0.17
RAB3D-201ENST00000222120 NMUR2Q9GZQ4 415 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 IPO11Q9UI26 975 aaKnown RBP13.96□□□□□ -0.17
RAB3D-201ENST00000222120 UBA6A0AVT1 1052 aaPredicted RBP13.96□□□□□ -0.17
RAB3D-201ENST00000222120 PHGDHO43175 533 aaKnown RBP13.96□□□□□ -0.17
RAB3D-201ENST00000222120 ATG7O95352 703 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 BDNFP23560 247 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 SLC1A6P48664 564 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 SLC25A11Q02978 314 aaKnown RBP13.96□□□□□ -0.17
RAB3D-201ENST00000222120 ADGRD1Q6QNK2 874 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 IGDCC3Q8IVU1 814 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 B3GALNT2Q8NCR0 500 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 FAM13CQ8NE31 585 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 SLC44A1Q8WWI5 657 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 CSPG4P5Q96PW8 444 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 LRRC40Q9H9A6 602 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 SP110Q9HB58 689 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 SARS2Q9NP81 518 aaKnown RBP13.96□□□□□ -0.17
RAB3D-201ENST00000222120 TMPRSS4Q9NRS4 437 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 ZNF112Q9UJU3 913 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 CLUHO75153 1309 aa13.96□□□□□ -0.17
RAB3D-201ENST00000222120 GOLGA8CPA6NN73 597 aa13.96□□□□□ -0.18
RAB3D-201ENST00000222120 STRNO43815 780 aa13.96□□□□□ -0.18
RAB3D-201ENST00000222120 KRT36O76013 467 aa13.96□□□□□ -0.18
RAB3D-201ENST00000222120 METTL18O95568 372 aa13.96□□□□□ -0.18
RAB3D-201ENST00000222120 PTPN1P18031 435 aaKnown RBP13.96□□□□□ -0.18
RAB3D-201ENST00000222120 MPP3Q13368 585 aa13.96□□□□□ -0.18
RAB3D-201ENST00000222120 TCEAL1Q15170 157 aa13.96□□□□□ -0.18
RAB3D-201ENST00000222120 SNX30Q5VWJ9 437 aa13.96□□□□□ -0.18
RAB3D-201ENST00000222120 TTC30AQ86WT1 665 aa13.96□□□□□ -0.18
RAB3D-201ENST00000222120 NAT8LQ8N9F0 302 aa13.96□□□□□ -0.18
RAB3D-201ENST00000222120 PEBP4Q96S96 227 aa13.96□□□□□ -0.18
RAB3D-201ENST00000222120 SMIM28A0A1B0GU29 152 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 PRPF4O43172 522 aaKnown RBP eCLIP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 PAMP19021 973 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 COPAP53621 1224 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 KIF19Q2TAC6 998 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 KLC3Q6P597 504 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 STK32AQ8WU08 396 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 P2RY11Q96G91 374 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 APBA2Q99767 749 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 RNPEPL1Q9HAU8 725 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 A0A0A0MRY4 1105 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 CXorf49A8MYA2 514 aaPredicted RBP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 DCXO43602 365 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 YBX3P16989 372 aaKnown RBP eCLIP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 ERCC2P18074 760 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 UBAP2LQ14157 1087 aaKnown RBP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 DNAL1Q4LDG9 190 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 EMC10Q5UCC4 262 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 DRICH1Q6PGQ1 229 aaPredicted RBP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 GPR142Q7Z601 462 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 TFAP2DQ7Z6R9 452 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 ZNF410Q86VK4 478 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 CMASQ8NFW8 434 aaPredicted RBP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 SPATA13Q96N96 652 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 MYO18AQ92614 2054 aaKnown RBP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 A0A096LPK6 155 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 PABPN1LA6NDY0 278 aaKnown RBP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 TOP3BO95985 862 aaKnown RBP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 VHLP40337 213 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 GRM5P41594 1212 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 STX1BP61266 288 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 PPM1JQ5JR12 505 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 SLC30A9Q6PML9 568 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 CXCL17Q6UXB2 119 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 C4orf22Q6V702 233 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 MPP5Q8N3R9 675 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 ZBED3Q96IU2 234 aaPredicted RBP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 TKTL2Q9H0I9 626 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 XPNPEP3Q9NQH7 507 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 RUVBL2Q9Y230 463 aaKnown RBP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 EFR3BQ9Y2G0 817 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 TREHO43280 583 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 TFE3P19532 575 aaPredicted RBP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 OR1G1P47890 313 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 SCNN1GP51170 649 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 SLC25A3Q00325 362 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 MAP3K10Q02779 954 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 NSUN2Q08J23 767 aaKnown RBP eCLIP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 C9orf57Q5W0N0 161 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 SERPINI1Q99574 410 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 ZNF670Q9BS34 389 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 GBA2Q9HCG7 927 aaPredicted RBP13.95□□□□□ -0.18
RAB3D-201ENST00000222120 BCAP29Q9UHQ4 241 aa13.95□□□□□ -0.18
RAB3D-201ENST00000222120 C2CD2LO14523 706 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 MGRN1O60291 552 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 IQCF3P0C7M6 154 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 CPB1P15086 417 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 NUDT2P50583 147 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 TCHHL1Q5QJ38 904 aaPredicted RBP13.94□□□□□ -0.18
RAB3D-201ENST00000222120 SPATA6LQ8N4H0 392 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 MCRS1Q96EZ8 462 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 CLPTM1LQ96KA5 538 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 TSPYL2Q9H2G4 693 aaPredicted RBP13.94□□□□□ -0.18
RAB3D-201ENST00000222120 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 CAB39LQ9H9S4 337 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 PFDN4Q9NQP4 134 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 DCDC2Q9UHG0 476 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms