RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SCHIP1Q9P0W5 487 aaPredicted RBP14.12□□□□□ -0.15
SIX4-201ENST00000216513 COL20A1Q9P218 1284 aa14.12□□□□□ -0.15
SIX4-201ENST00000216513 BAZ2BQ9UIF8 2168 aaKnown RBP14.11□□□□□ -0.15
SIX4-201ENST00000216513 CENPAP49450 140 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 CYP4F8P98187 520 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 PFKPQ01813 784 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 CUL3Q13618 768 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 GLT6D1Q7Z4J2 308 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 NRSN1Q8IZ57 195 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 SPPL2BQ8TCT7 592 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 SHOC2Q9UQ13 582 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 TMEM253P0C7T8 217 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 SLC6A3Q01959 620 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 MORF4L2Q15014 288 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 KCNT2Q6UVM3 1135 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 SYTL1Q8IYJ3 562 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 TBC1D14Q9P2M4 693 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.11□□□□□ -0.15
SIX4-201ENST00000216513 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.11□□□□□ -0.15
SIX4-201ENST00000216513 RAD51CO43502 376 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 STAU1O95793 577 aaKnown RBP14.11□□□□□ -0.15
SIX4-201ENST00000216513 CCNE2O96020 404 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 PTPN7P35236 360 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 TIGD5Q53EQ6 642 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 CBWD3Q5JTY5 395 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 CBWD5Q5RIA9 395 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 C1orf186Q6ZWK4 172 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 NOA1Q8NC60 698 aaKnown RBP14.11□□□□□ -0.15
SIX4-201ENST00000216513 SMIM28A0A1B0GU29 152 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 HPGDP15428 266 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 AMPD1P23109 780 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 TKTP29401 623 aaKnown RBP14.11□□□□□ -0.15
SIX4-201ENST00000216513 KRT20P35900 424 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 ANKRD20A4Q4UJ75 823 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 C2orf27AQ580R0 203 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 ANKRD20A8PQ5CZ79 823 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 ANKRD20A2Q5SQ80 823 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 ANKRD20A1Q5TYW2 823 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 CFAP52Q8N1V2 620 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 AURKCQ9UQB9 309 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 EOMESO95936 686 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 TRIM32Q13049 653 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 TP53BP2Q13625 1128 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 PSD3Q9NYI0 1048 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 KLHL3Q9UH77 587 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 RNF112Q9ULX5 631 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 SUFUQ9UMX1 484 aa14.11□□□□□ -0.15
SIX4-201ENST00000216513 KANSL1LA0AUZ9 987 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 EIF2S1P05198 315 aaKnown RBP14.1□□□□□ -0.15
SIX4-201ENST00000216513 PFKMP08237 780 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 FDFT1P37268 417 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 MAP3K10Q02779 954 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 CDC16Q13042 620 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 ZDHHC17Q8IUH5 632 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 CASP10Q92851 521 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 KLRG2A4D1S0 409 aaPredicted RBP14.1□□□□□ -0.15
SIX4-201ENST00000216513 ZSCAN9O15535 394 aaPredicted RBP14.1□□□□□ -0.15
SIX4-201ENST00000216513 GJB6O95452 261 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 TRUB2O95900 331 aaKnown RBP14.1□□□□□ -0.15
SIX4-201ENST00000216513 GNSP15586 552 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 SARSP49591 514 aaKnown RBP14.1□□□□□ -0.15
SIX4-201ENST00000216513 HMGB4Q8WW32 186 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 LENG9Q96B70 501 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 ABHD8Q96I13 439 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 C12orf42Q96LP6 360 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 MRPL45Q9BRJ2 306 aaKnown RBP14.1□□□□□ -0.15
SIX4-201ENST00000216513 APOBEC2Q9Y235 224 aaKnown RBP14.1□□□□□ -0.15
SIX4-201ENST00000216513 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.1□□□□□ -0.15
SIX4-201ENST00000216513 SOAT2O75908 522 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 SLC8A1P32418 973 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 CAPZA2P47755 286 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 KYNUQ16719 465 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 UNC93AQ86WB7 457 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 CYP4X1Q8N118 509 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 C10orf53Q8N6V4 93 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 TEX12Q9BXU0 123 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 ZNF510Q9Y2H8 683 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 GLP2RO95838 553 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 RFC2P35250 354 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 PPP2R2AP63151 447 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 OVGP1Q12889 678 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 LRRC8EQ6NSJ5 796 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 NLRP14Q86W24 1093 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 IFNEQ86WN2 208 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 TMEM161BQ8NDZ6 487 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 CLEC4DQ8WXI8 215 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 HAS1Q92839 578 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 GLMNQ92990 594 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 RHBGQ9H310 441 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 NEU2Q9Y3R4 380 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 A0A1W2PQH9 124 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 O00370 1275 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 MDM4O15151 490 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 TSPAN1O60635 241 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 PAEPP09466 180 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 OR10G6Q8NH81 332 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 HERVK_113Q902F9 699 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 C10orf88Q9H8K7 445 aa14.1□□□□□ -0.15
SIX4-201ENST00000216513 GPN3Q9UHW5 284 aaPredicted RBP14.1□□□□□ -0.15
SIX4-201ENST00000216513 XRN1Q8IZH2 1706 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms