RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 PTPRHQ9HD43 1115 aa12.42□□□□□ -0.42
CHPF2-201ENST00000035307 MIOSQ9NXC5 875 aa12.42□□□□□ -0.42
CHPF2-201ENST00000035307 SKIP12755 728 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 POU6F1Q14863 301 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 PDCD2Q16342 344 aaPredicted RBP12.41□□□□□ -0.42
CHPF2-201ENST00000035307 MARCH8Q5T0T0 291 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 MREGQ8N565 214 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 COLGALT1Q8NBJ5 622 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 SCAMP5Q8TAC9 235 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 GRAMD1AQ96CP6 724 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 SH3GL2Q99962 352 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 OSBPL7Q9BZF2 842 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 CYP3A43Q9HB55 503 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 ANLNQ9NQW6 1124 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 SLC12A6Q9UHW9 1150 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 IGKV6D-21A0A0A0MT36 114 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 MEI4A8MW99 385 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 KPNA6O60684 536 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 DRD4P21917 467 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 MGAT1P26572 445 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 SERPINB3P29508 390 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 ATICP31939 592 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 YWHAZP63104 245 aaKnown RBP12.41□□□□□ -0.42
CHPF2-201ENST00000035307 PLIN5Q00G26 463 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 TMEM259Q4ZIN3 620 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 TIGD5Q53EQ6 642 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 RPAINQ86UA6 219 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 KATNAL2Q8IYT4 538 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 RASGEF1CQ8N431 466 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 ZNF784Q8NCA9 323 aaPredicted RBP12.41□□□□□ -0.42
CHPF2-201ENST00000035307 MYLPFQ96A32 169 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 VPS39Q96JC1 886 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 GPR88Q9GZN0 384 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 SLC4A7Q9Y6M7 1214 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 ZC3H4Q9UPT8 1303 aaKnown RBP12.41□□□□□ -0.42
CHPF2-201ENST00000035307 C3orf70A6NLC5 250 aaPredicted RBP12.41□□□□□ -0.42
CHPF2-201ENST00000035307 CILPO75339 1184 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 ANP32DO95626 131 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 CTGFP29279 349 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 HOXA11P31270 313 aaPredicted RBP12.41□□□□□ -0.42
CHPF2-201ENST00000035307 NME5P56597 212 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 NOMO2Q5JPE7 1267 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 ANKRD22Q5VYY1 191 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 PTPRN2Q92932 1015 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 ART4Q93070 314 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 MAGEB18Q96M61 343 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 WWP1Q9H0M0 922 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 LRRC19Q9H756 370 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 CHST12Q9NRB3 414 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 ZMYND8Q9ULU4 1186 aaPredicted RBP12.41□□□□□ -0.42
CHPF2-201ENST00000035307 C2CD2Q9Y426 696 aa12.41□□□□□ -0.42
CHPF2-201ENST00000035307 DNAH12Q6ZR08 3092 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 ENO4A6NNW6 628 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 BTNL10A8MVZ5 291 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 E9PBE3 544 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 KLHL41O60662 606 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 LSM8O95777 96 aaKnown RBP12.4□□□□□ -0.42
CHPF2-201ENST00000035307 MMP8P22894 467 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 DPYSL3Q14195 570 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 ACCSLQ4AC99 568 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 UBAP2Q5T6F2 1119 aaKnown RBP12.4□□□□□ -0.42
CHPF2-201ENST00000035307 SLFN11Q7Z7L1 901 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 RBM23Q86U06 439 aaKnown RBP12.4□□□□□ -0.42
CHPF2-201ENST00000035307 CHSY1Q86X52 802 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 CD302Q8IX05 232 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 FUKQ8N0W3 1084 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 CYP4X1Q8N118 509 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 ATPAF2Q8N5M1 289 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 EFCAB3Q8N7B9 438 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 DDX27Q96GQ7 796 aaKnown RBP12.4□□□□□ -0.42
CHPF2-201ENST00000035307 SNRNP25Q9BV90 132 aaKnown RBP12.4□□□□□ -0.42
CHPF2-201ENST00000035307 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.4□□□□□ -0.428e-6■□□□□ 9
CHPF2-201ENST00000035307 STOML1Q9UBI4 398 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 SLC12A8A0AV02 714 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 SNX3O60493 162 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 ZFXP17010 805 aaPredicted RBP12.4□□□□□ -0.42
CHPF2-201ENST00000035307 STX1BP61266 288 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 GAD2Q05329 585 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 DUSP4Q13115 394 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 HSP90AA5PQ58FG0 334 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 PRSS55Q6UWB4 352 aaPredicted RBP12.4□□□□□ -0.42
CHPF2-201ENST00000035307 ZNF280BQ86YH2 543 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 IFT43Q96FT9 208 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 PAWRQ96IZ0 340 aaKnown RBP12.4□□□□□ -0.42
CHPF2-201ENST00000035307 TBCBQ99426 244 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 TMEM120AQ9BXJ8 343 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 MYLK2Q9H1R3 596 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 GRHL1Q9NZI5 618 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 A8MUI8 341 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 BUD23O43709 281 aaKnown RBP12.4□□□□□ -0.42
CHPF2-201ENST00000035307 RCN1Q15293 331 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 TTC39BQ5VTQ0 682 aaPredicted RBP12.4□□□□□ -0.42
CHPF2-201ENST00000035307 ELMO2Q96JJ3 720 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 SNX27Q96L92 541 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 RPRD1AQ96P16 312 aaPredicted RBP12.4□□□□□ -0.42
CHPF2-201ENST00000035307 PIDD1Q9HB75 910 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 V9GYQ6 96 aa12.4□□□□□ -0.42
CHPF2-201ENST00000035307 ATP8B3O60423 1300 aa12.4□□□□□ -0.43
CHPF2-201ENST00000035307 MYO18AQ92614 2054 aaKnown RBP12.4□□□□□ -0.43
CHPF2-201ENST00000035307 hCG_1818297A0A087WSY0 165 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms