RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 SERPINA13PQ6UXR4 307 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 LRRC55Q6ZSA7 311 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 NYAP1Q6ZVC0 841 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 ADGRB2O60241 1585 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 APOC4-APOC2K7ER74 178 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 ZW10O43264 779 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 APOC2P02655 101 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 CNTFP26441 200 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 NPY2RP49146 381 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 CSHL1Q14406 222 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 OTOAQ7RTW8 1153 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 RGL4Q8IZJ4 473 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 FAM9CQ8IZT9 166 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 SEZ6LQ9BYH1 1024 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 CTNNAL1Q9UBT7 734 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 USP15Q9Y4E8 981 aaPredicted RBP11.37□□□□□ -0.59
RGPD5-201ENST00000016946 PPP1R11O60927 126 aaPredicted RBP11.37□□□□□ -0.59
RGPD5-201ENST00000016946 FGFR1P11362 822 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 CDC25CP30307 473 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 HSD17B3P37058 310 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 BTKQ06187 659 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 RBM23Q86U06 439 aaKnown RBP11.37□□□□□ -0.59
RGPD5-201ENST00000016946 SUGP1Q8IWZ8 645 aaKnown RBP11.37□□□□□ -0.59
RGPD5-201ENST00000016946 GAS2L1Q99501 681 aaPredicted RBP11.37□□□□□ -0.59
RGPD5-201ENST00000016946 GANQ9H2C0 597 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 VPS51Q9UID3 782 aa11.37□□□□□ -0.59
RGPD5-201ENST00000016946 SMIM28A0A1B0GU29 152 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 SCAMP3O14828 347 aaKnown RBP11.36□□□□□ -0.59
RGPD5-201ENST00000016946 SKAP2O75563 359 aaPredicted RBP11.36□□□□□ -0.59
RGPD5-201ENST00000016946 GJB6O95452 261 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 ITGA9Q13797 1035 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 PNMA8BQ9ULN7 279 aaPredicted RBP11.36□□□□□ -0.59
RGPD5-201ENST00000016946 ARHGAP26Q9UNA1 814 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 TREHO43280 583 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 ICAM3P32942 547 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 CMTM5Q96DZ9 223 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 ZNF333Q96JL9 665 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 FUCA2Q9BTY2 467 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 CCDC90BQ9GZT6 254 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 ACTR8Q9H981 624 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 CAPN10Q9HC96 672 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 DERAQ9Y315 318 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 PCDHA3Q9Y5H8 950 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 KLRC4O43908 158 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 SMPD1P17405 629 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 CDH2P19022 906 aaPredicted RBP11.36□□□□□ -0.59
RGPD5-201ENST00000016946 HALP42357 657 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 FUT2Q10981 343 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 SMARCB1Q12824 385 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 SYTL1Q8IYJ3 562 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 HJURPQ8NCD3 748 aaPredicted RBP11.36□□□□□ -0.59
RGPD5-201ENST00000016946 CXorf38Q8TB03 319 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 TSEN34Q9BSV6 310 aaKnown RBP11.36□□□□□ -0.59
RGPD5-201ENST00000016946 ELOVL6Q9H5J4 265 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 TLE6Q9H808 572 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 MTA2O94776 668 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 GPC1P35052 558 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 BOP1Q14137 746 aaKnown RBP11.36□□□□□ -0.59
RGPD5-201ENST00000016946 FAM35AQ86V20 835 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 ZDHHC6Q9H6R6 413 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.36□□□□□ -0.59
RGPD5-201ENST00000016946 SIGLEC16A6NMB1 481 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 AIM2O14862 343 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 OR56A5P0C7T3 313 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 ANXA11P50995 505 aaKnown RBP11.36□□□□□ -0.59
RGPD5-201ENST00000016946 C16orf89Q6UX73 402 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 OTOP2Q7RTS6 562 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 DTNAQ9Y4J8 743 aa11.36□□□□□ -0.59
RGPD5-201ENST00000016946 MRPL42Q9Y6G3 142 aaKnown RBP11.36□□□□□ -0.59
RGPD5-201ENST00000016946 FAM237AA0A1B0GTK4 181 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 GNRH1P01148 92 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 ZNF143P52747 638 aaPredicted RBP11.35□□□□□ -0.59
RGPD5-201ENST00000016946 PRKAA1Q13131 559 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 ZC3H12BQ5HYM0 836 aaKnown RBP11.35□□□□□ -0.59
RGPD5-201ENST00000016946 ST13P4Q8IZP2 240 aaPredicted RBP11.35□□□□□ -0.59
RGPD5-201ENST00000016946 CEP19Q96LK0 163 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 LRRC10BA6NIK2 292 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 CYP2A7P20853 494 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 PRKCIP41743 596 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 PRIM2P49643 509 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 CNTN1Q12860 1018 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 BMT2Q1RMZ1 405 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 RARS2Q5T160 578 aaKnown RBP11.35□□□□□ -0.59
RGPD5-201ENST00000016946 USP45Q70EL2 814 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 GLT6D1Q7Z4J2 308 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 BRI3BPQ8WY22 251 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 SHC3Q92529 594 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 OTULINQ96BN8 352 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 OMDQ99983 421 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 CDC42EP4Q9H3Q1 356 aaKnown RBP11.35□□□□□ -0.59
RGPD5-201ENST00000016946 PCDHA2Q9Y5H9 948 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 LOC100653049A0A140TA62 436 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 KRT34O76011 436 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 FAM107AO95990 144 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 MAP2P11137 1827 aaKnown RBP11.35□□□□□ -0.59
RGPD5-201ENST00000016946 SNRPD1P62314 119 aaKnown RBP11.35□□□□□ -0.59
RGPD5-201ENST00000016946 CRHR2Q13324 411 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 DDR2Q16832 855 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 ERP27Q96DN0 273 aa11.35□□□□□ -0.59
RGPD5-201ENST00000016946 PANX3Q96QZ0 392 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms