RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 HDDC3Q8N4P3 179 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 C1orf216Q8TAB5 229 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 EDEM1Q92611 657 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 PRCCQ92733 491 aaPredicted RBP16.55■□□□□ 0.24
ERCC1-201ENST00000013807 SIPA1Q96FS4 1042 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 TOE1Q96GM8 510 aaKnown RBP16.55■□□□□ 0.24
ERCC1-201ENST00000013807 NUP58Q9BVL2 599 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 MAN1B1Q9UKM7 699 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 WDFY3Q8IZQ1 3526 aa16.55■□□□□ 0.24
ERCC1-201ENST00000013807 FBXO21O94952 628 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 GNA14O95837 355 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 PRKCHP24723 683 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 LRMPQ12912 555 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 NNTQ13423 1086 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 MORC3Q14149 939 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 MEA1Q16626 185 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 PIK3R6Q5UE93 754 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 NUGGCQ68CJ6 796 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 SMYD5Q6GMV2 418 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 ZNF557Q8N988 423 aaPredicted RBP16.54■□□□□ 0.24
ERCC1-201ENST00000013807 EHBP1Q8NDI1 1231 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 OR2T3Q8NH03 318 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 FBRSQ9HAH7 460 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 PCDHB4Q9Y5E5 795 aa16.54■□□□□ 0.24
ERCC1-201ENST00000013807 ANKRD11Q6UB99 2663 aaPredicted RBP16.53■□□□□ 0.24
ERCC1-201ENST00000013807 ZFHX4Q86UP3 3567 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 TMEM131Q92545 1883 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 SPEGQ15772 3267 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 A0A1B0GTW7 788 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 BICDL2A1A5D9 508 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 LTFP02788 710 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 FYNP06241 537 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 EPHX1P07099 455 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 LCP1P13796 627 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 ZBTB16Q05516 673 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 FOXC1Q12948 553 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 PTPRNQ16849 979 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 PLEKHG6Q3KR16 790 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 FAM133BQ5BKY9 247 aaKnown RBP16.53■□□□□ 0.24
ERCC1-201ENST00000013807 SERPINA13PQ6UXR4 307 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 UNQ6494/PRO21346Q6UXR6 183 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 RGL4Q8IZJ4 473 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 AHI1Q8N157 1196 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 PPM1KQ8N3J5 372 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 STK32AQ8WU08 396 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 SORCS1Q8WY21 1168 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 GATA6Q92908 595 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 KAT5Q92993 513 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 LMLNQ96KR4 655 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 SCNM1Q9BWG6 230 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 GTPBP2Q9BX10 602 aaKnown RBP16.53■□□□□ 0.24
ERCC1-201ENST00000013807 ADAM33Q9BZ11 813 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 CIPCQ9C0C6 399 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 FSCN3Q9NQT6 498 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 PLA2G4CQ9UP65 541 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 NEUROG3Q9Y4Z2 214 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 PTPRBP23467 1997 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 TP53BP1Q12888 1972 aaPredicted RBP16.53■□□□□ 0.24
ERCC1-201ENST00000013807 PKD1L2Q7Z442 2459 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 PLXNB3Q9ULL4 1909 aa16.53■□□□□ 0.24
ERCC1-201ENST00000013807 NYNRINQ9P2P1 1898 aaKnown RBP16.52■□□□□ 0.24
ERCC1-201ENST00000013807 TMEM8BA6NDV4 472 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 H0Y626 953 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 MSI1O43347 362 aaKnown RBP16.52■□□□□ 0.24
ERCC1-201ENST00000013807 TRIM16O95361 564 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 DLDP09622 509 aaKnown RBP16.52■□□□□ 0.24
ERCC1-201ENST00000013807 ZNF883P0CG24 379 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 MAOBP27338 520 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 GPD2P43304 727 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 SLC11A2P49281 568 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 KCNH2Q12809 1159 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 CCDC40Q4G0X9 1142 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 CHST9Q7L1S5 443 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 FIBINQ8TAL6 211 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 ERLEC1Q96DZ1 483 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 SLC39A13Q96H72 371 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 GPR174Q9BXC1 333 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 OSGEPQ9NPF4 335 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 GGA2Q9UJY4 613 aa16.52■□□□□ 0.24
ERCC1-201ENST00000013807 C1QTNF9BB2RNN3 333 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 SART1O43290 800 aaKnown RBP16.51■□□□□ 0.23
ERCC1-201ENST00000013807 ACSL4O60488 711 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 TSPAN3O60637 253 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 TOP3BO95985 862 aaKnown RBP16.51■□□□□ 0.23
ERCC1-201ENST00000013807 ATP5BP06576 529 aaKnown RBP16.51■□□□□ 0.23
ERCC1-201ENST00000013807 C1QTNF9P0C862 333 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 PABPC1P11940 636 aaKnown RBP16.51■□□□□ 0.23
ERCC1-201ENST00000013807 SLC6A4P31645 630 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 RGS7P49802 495 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 SGSHP51688 502 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 ARID5BQ14865 1188 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 DCAF12L1Q5VU92 463 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 ISM2Q6H9L7 571 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 DBX2Q6ZNG2 339 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 KDM1BQ8NB78 822 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 NELFBQ8WX92 580 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 TTC17Q96AE7 1141 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 KREMEN1Q96MU8 473 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 SLC4A5Q9BY07 1137 aa16.51■□□□□ 0.23
ERCC1-201ENST00000013807 ABCB8Q9NUT2 735 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms