RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Catsper3Q80W99 395 aa18.83■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Fam205cQ80YD3 371 aa18.83■□□□□ 0.6
Scaf11-201ENSMUST00000047835 SntnQ8C9X1 147 aa18.83■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Unc5bQ8K1S3 945 aa18.83■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Znf609Q8BZ47 1413 aa18.83■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Ttc30a2A2AKQ8 664 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Aldh1a1P24549 501 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Mfhas1Q3V1N1 1048 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Tdrd7Q8K1H1 1086 aaKnown RBP18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Ttc30bQ9CY00 664 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Gm5485A0A1D5RM98 91 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Pon1P52430 355 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Mc4rP56450 332 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Ubtfl1Q3USZ2 394 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Tpp2Q64514 1262 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Duoxa2Q9D311 320 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Nipsnap3aB1AWZ3 247 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Ifi213D3Z5G0 586 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 XntrpcF8VQM8 1264 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Resp18P47939 175 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Ulbp1Q8HWA3 334 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Epn3Q91W69 636 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Cog2Q921L5 731 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Trpc2Q9R244 1172 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Lypla2Q9WTL7 231 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Zfp882E9Q4R4 555 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Styk1Q6J9G1 429 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Msantd2Q6NZR2 559 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Onecut3Q8K557 490 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Kdelr1Q99JH8 212 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Mphosph6Q9D1Q1 161 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Oma1Q9D8H7 521 aa18.82■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Fgfr2P21803 821 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Adra1dP97714 562 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Arhgap26Q6ZQ82 814 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Rbm12b1Q80YR9 836 aaKnown RBP18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 AopepQ8BXQ6 817 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Cyp4f14Q9EP75 524 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Nav1Q8CH77 1875 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Maml3D4QGC2 1135 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Vmn2r74E9PW21 853 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Pitpnm3Q3UHE1 974 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 ItgadQ3V0T4 1168 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Flot2Q60634 428 aaKnown RBP18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Pgs1Q8BHF7 553 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 PigxQ99LV7 254 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Terb2Q9D494 218 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Scnn1bQ9WU38 638 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Gm21973F6WEZ7 68 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Cdh9P70407 786 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Hspa1aQ61696 641 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 PapolgQ6PCL9 739 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Zdhhc19Q810M5 347 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Q8CCC3 530 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 4932414N04RikQ8CEQ9 752 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Utp6Q8VCY6 597 aaKnown RBP18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Hao1Q9WU19 370 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 NktrP30415 1453 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Lilra5D3Z7A9 295 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Gm3755K7N743 167 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Hoxc6P10629 235 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 BegainQ68EF6 600 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Slain1Q68FF7 579 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Fnip2Q80TD3 1108 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Dis3lQ8C0S1 1053 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Rbm34Q8C5L7 375 aaKnown RBP18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Slc47a1Q8K0H1 567 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 NlnQ91YP2 704 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Cntnap2Q9CPW0 1332 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Htr3aP23979 487 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Dpep1P31428 410 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Rad51Q08297 339 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Cyb5r4Q3TDX8 528 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Gpd2Q64521 727 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Bri3bpQ8BXV2 253 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Slc44a2Q8BY89 706 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Cnot3Q8K0V4 751 aaKnown RBP18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Cdc16Q8R349 620 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Aim2Q91VJ1 354 aaKnown RBP18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 CygbQ9CX80 190 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Pbld2Q9CXN7 288 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Sun1Q9D666 913 aaKnown RBP18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Slc25a19Q9DAM5 318 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 ThegQ9JMB1 375 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Ror1Q9Z139 937 aa18.81■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Hesx1Q61658 185 aa18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Nfe2l1Q61985 741 aa18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Lrrc24Q8BHA1 521 aa18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Nkd1Q99MH6 471 aa18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Ddi1Q9DAF3 408 aa18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Dpy19l4A2AJQ3 722 aa18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Rsrc2A2RTL5 376 aaKnown RBP18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Psmb9P28076 219 aa18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 HpcaP84075 193 aa18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 MylpfP97457 169 aa18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Arid5aQ3U108 590 aa18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Xlr3cQ61806 226 aa18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Adam6bQ6IMH7 756 aa18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 PstkQ8BP74 359 aa18.8■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Mmp3P28862 477 aa18.8■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms