RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Olfr615Q8VGY4 313 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Nme5Q99MH5 211 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 PompQ9CQT5 141 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 DcpsQ9DAR7 338 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Plscr2Q9DCW2 307 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Thap11Q9JJD0 305 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Bmp10Q9R229 421 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Trpc2Q9R244 1172 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 FarsbQ9WUA2 589 aaKnown RBP8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Arih1Q9Z1K5 555 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Adamtsl1Q8BLI0 1745 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Smok3cA0A087WSF2 504 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Map7d3A2AEY4 876 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Sult2a3D3Z1W5 285 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 PtproE9Q612 1226 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Spata31E9QAF0 1014 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Pmm1O35621 262 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Pdlim1O70400 327 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 AlbP07724 608 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 CtshP49935 333 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Gdi1P50396 447 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Adcy6Q01341 1165 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Hdgfl2Q3UMU9 669 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Elf3Q3UPW2 391 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 FcgrtQ61559 365 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Cyp2c29Q64458 490 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Slc39a10Q6P5F6 833 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Scaf4Q6PFF0 1209 aaKnown RBP8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Bpifb3Q80ZU7 473 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Utp15Q8C7V3 528 aaKnown RBP8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Panx3Q8CEG0 392 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Polr2bQ8CFI7 1174 aaKnown RBP8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 OgtQ8CGY8 1046 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 OscarQ8VBT3 265 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 PlvapQ91VC4 438 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 FtcdQ91XD4 541 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Lrrc49Q91YK0 686 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Rad51cQ924H5 366 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Borcs5Q9D920 195 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 GhrlQ9EQX0 117 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Chrac1Q9JKP8 129 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Rasgrp2Q9QUG9 608 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Pcsk1nQ9QXV0 258 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Mocs3A2BDX3 460 aaKnown RBP8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Galntl6E5D8G1 601 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Dpysl4O35098 572 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 FynP39688 537 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Srebf2Q3U1N2 1130 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Macrod2Q3UYG8 475 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 DcstampQ7TNJ0 470 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Atg4cQ811C2 458 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Lrrc24Q8BHA1 521 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Hdac7Q8C2B3 938 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Gpc3Q8CFZ4 579 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 CopaQ8CIE6 1224 aaKnown RBP8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 UvragQ8K245 698 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Lnx2Q91XL2 687 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Pcdha9Q91Y11 979 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Catsper1Q91ZR5 686 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Polr3fQ921X6 316 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Decr1Q9CQ62 335 aaKnown RBP8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Utp11Q9CZJ1 253 aaKnown RBP8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Cul2Q9D4H8 745 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Slc25a19Q9DAM5 318 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Krt7Q9DCV7 457 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 PolmQ9JIW4 496 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Asb1Q9WV74 336 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Mbd1Q9Z2E2 636 aa8.5□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Gm4846B2RWH8 538 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Gm28043E0CXC2 719 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Spin2fJ3QPU0 254 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Bmpr2O35607 1038 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Impa1O55023 277 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 CnpP16330 420 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 LynP25911 512 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Stt3aP46978 705 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Usp10P52479 792 aaKnown RBP8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 PkmP52480 531 aaKnown RBP8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 SnnP61807 88 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Grb7Q03160 535 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Trim71Q1PSW8 855 aaKnown RBP8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Zc3h15Q3TIV5 426 aaKnown RBP8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 9130409I23RikQ3TS87 320 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Trim38Q5SZ99 471 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 P4ha2Q60716 537 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Hsph1Q61699 858 aaKnown RBP8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Aldh1a2Q62148 518 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Tfdp2Q64163 446 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Zrsr1Q64707 428 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Gabbr2Q80T41 940 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Dars2Q8BIP0 653 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Nlrp4bQ8C6J9 863 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Angel2Q8K1C0 544 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Defb15Q8R2I5 79 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Tmcc3Q8R310 477 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 CpzQ8R4V4 654 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Chst12Q99LL3 419 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Itgb3bpQ9CQ82 176 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Kcnq4Q9JK97 696 aa8.49□□□□□ -1.05
Cdc40-201ENSMUST00000044166 Btbd35f28A2CFD5 498 aa8.49□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms