RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Abce1P61222 599 aaKnown RBP13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Trim71Q1PSW8 855 aaKnown RBP13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gm3414Q3TNU4 584 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Nlrc4Q3UP24 1024 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Traf3Q60803 567 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Papss1Q60967 624 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 DcstampQ7TNJ0 470 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Olfr792Q7TRH9 311 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Atp6v0d2Q80SY3 350 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Qsox1Q8BND5 748 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Arhgap25Q8BYW1 648 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 BsndQ8VIM4 307 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Glra3Q91XP5 464 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Afg3l1Q920A7 789 aaKnown RBP13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Fam49bQ921M7 324 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Krcc1Q99JT5 256 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Mrps17Q9CQE3 120 aaKnown RBP13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 ProzQ9CQW3 399 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 RalbQ9JIW9 206 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Rbck1Q9WUB0 508 aa13.81□□□□□ -0.2
Nup88-201ENSMUST00000035283 Pramef17A2ASJ1 475 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Vmn2r84D3YWE3 849 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Cd3gP11942 182 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Atp5bP56480 529 aaKnown RBP13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 CiitaP79621 1155 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gdf3Q07104 366 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Pcnx4Q3UVY5 1174 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Catsper3Q80W99 395 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Klhl38Q8BSF5 581 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Pggt1bQ8BUY9 377 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Tor1aip2Q8BYU6 502 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Mkl1Q8K4J6 964 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Mrpl58Q8R035 206 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Prpsap2Q8R574 369 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Nsmce2Q91VT1 247 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ak5Q920P5 562 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Rec114Q9CWH4 259 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Fndc8Q9D2H8 321 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ppp2r3cQ9JK24 453 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 A0A1Y7VP24 259 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Zmynd8A2A484 1235 aaKnown RBP13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 2310061I04RikB8JJ69 315 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Rad51ap2G3UW63 976 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ckmt1P30275 418 aaKnown RBP13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Msx3P70354 204 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Neurog2P70447 263 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 UtyP79457 1212 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Hsdl2Q2TPA8 490 aaKnown RBP13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gprin1Q3UNH4 932 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 MyrfQ3UR85 1138 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Fam129aQ3UW53 926 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Fam198aQ3UY90 562 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Srbd1Q497V5 1015 aaKnown RBP13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Clhc1Q5M6W3 596 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 GapdhsQ64467 440 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Moxd2Q7TT41 619 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Clasp2Q8BRT1 1286 aaKnown RBP13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Slc36a1Q8K4D3 475 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Snx15Q91WE1 337 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Nmd3Q99L48 503 aaKnown RBP13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 PmpcbQ9CXT8 489 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 GOLGA7BQ9D428 167 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 1700080O16RikQ9D9G4 284 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Tbc1d20Q9D9I4 402 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Slc29a1Q9JIM1 460 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Fut2Q9JL27 347 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Dcun1d1Q9QZ73 259 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Tagln3Q9R1Q8 199 aa13.8□□□□□ -0.2
Nup88-201ENSMUST00000035283 Slfn9B1ARD6 910 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 NuggcD3YWJ0 796 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Edil3O35474 480 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Hcn3O88705 779 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ccna2P51943 422 aaKnown RBP13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Meaf6Q2VPQ9 191 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Trim38Q5SZ99 471 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Atp2a3Q64518 1038 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Spata20Q80YT5 790 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Trim14Q8BVW3 440 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Pak5Q8C015 719 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Cep57Q8CEE0 500 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Dedd2Q8QZV0 330 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Mtss1Q8R1S4 759 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ndfip2Q91ZP6 311 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Catsper1Q91ZR5 686 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 CygbQ9CX80 190 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Tmem115Q9WUH1 350 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Ern2Q9Z2E3 911 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Olfr391-psA0A0U1RNJ4 312 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Serpinb9O08797 374 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Magea1O89006 320 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Elk4P41158 430 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 TchpQ3TVW5 497 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gpd1lQ3ULJ0 351 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Heatr9Q5QNV8 569 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 DgkqQ6P5E8 934 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Mapk4Q6P5G0 583 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 C8aQ8K182 587 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Zdhhc7Q91WU6 308 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 Lpin1Q91ZP3 924 aa13.79□□□□□ -0.2
Nup88-201ENSMUST00000035283 KlbQ99N32 1043 aa13.79□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms