RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Ints6lQ8BND4 861 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ssh3Q8K330 649 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Mtfr1lQ9CWE0 289 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tmx2Q9D710 295 aaKnown RBP10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Zcchc7B1AX39 541 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pknox1O70477 436 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 CratP47934 626 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cd300lgQ1ERP8 331 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Bend6Q6PFX2 281 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 SvopQ8BFT9 548 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Luzp2Q8BGY3 345 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 HemgnQ9ERZ0 503 aa10.38□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ccdc120A2AEV7 629 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Slc16a2O70324 545 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 WapP01173 134 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Sat1P48026 171 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 2900092C05RikQ5I0V9 184 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ugt1a1Q63886 535 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fbxw8Q8BIA4 598 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Dupd1Q8BK84 215 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Kbtbd13Q8C828 458 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Adam32Q8K410 754 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Chst15Q91XQ5 561 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fam111aQ9D2L9 613 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tmed11Q9D2R4 215 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fbrsl1E9Q9T0 1031 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 MyocO70624 490 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 AvilO88398 819 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Klra4Q60651 263 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Foxo6Q70KY4 559 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Rap2cQ8BU31 183 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pcdha3Q91Y16 942 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Sntg2Q925E0 539 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Capn10Q9ESK3 666 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Shank2Q80Z38 1476 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Rbp3P49194 1234 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Kctd21Q3URF8 260 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nxpe4Q52KP5 543 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Lrfn2Q80TG9 788 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fndc3aQ8BX90 1198 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ing3Q8VEK6 421 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ggt7Q99JP7 662 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 St7Q99M96 577 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ergic3Q9CQE7 383 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 MkksQ9JI70 570 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 A0A1Y7VP24 259 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tmem45a2B7ZWJ5 289 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gm3095E9Q058 166 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 MttpO08601 894 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 AlbP07724 608 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Mtf2Q02395 593 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 1700061G19RikQ08EE8 705 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Brip1Q5SXJ3 1174 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nr1h4Q60641 488 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Smarcal1Q8BJL0 910 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Lsm14aQ8K2F8 462 aaKnown RBP10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Akt1s1Q9D1F4 257 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Actl7bQ9QY83 418 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Dcun1d1Q9QZ73 259 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Mad2l1Q9Z1B5 205 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 EXOC1LB9EK06 172 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ptpn11P35235 597 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tsc22d1P62500 1077 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Dennd1aQ8K382 1016 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cyp2c50Q91X77 490 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fam49bQ921M7 324 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Kremen1Q99N43 473 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Lactbl1S4R213 581 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 MndalD0QMC3 538 aaKnown RBP10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gon7P0C8B4 98 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cpa3P15089 417 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Shmt1P50431 478 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Usp46P62069 366 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gm8773Q3UQ24 132 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Stxbp2Q64324 593 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Slitrk1Q810C1 696 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Noc4lQ8BHY2 516 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Igdcc3Q8BQC3 813 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nsmce2Q91VT1 247 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Snrpb2Q9CQI7 225 aaKnown RBP10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Hspa12bQ9CZJ2 685 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 MceeQ9D1I5 178 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cnga3Q9JJZ8 631 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Dkk3Q9QUN9 349 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Creb3l1Q9Z125 519 aa10.37□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Dnmt1P13864 1620 aaKnown RBP10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gm3636E9Q5P1 227 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 AF366264G3X9P9 502 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 BpgmP15327 259 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Marcksl1P28667 200 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 YdjcQ14BV6 310 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Samhd1Q60710 627 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cdc14aQ6GQT0 603 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Q810S2 196 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Efr3aQ8BG67 819 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Setdb2Q8C267 713 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ston1Q8CDJ8 730 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Spag16Q8K450 639 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Oxnad1Q8VE38 311 aa10.36□□□□□ -0.75
Ubr1-201ENSMUST00000028728 CrebzfQ91ZR3 358 aa10.36□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms