RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Slc39a13Q8BZH0 361 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gm3411Q8C7R2 150 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tdrd7Q8K1H1 1086 aaKnown RBP11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Prpf39Q8K2Z2 665 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 OlahQ8R197 265 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Q9CR55 154 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 CacybpQ9CXW3 229 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Thg1lQ9CY52 298 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Rasgrp2Q9QUG9 608 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Wdr46Q9Z0H1 622 aaKnown RBP11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 4931406B18RikA2RSL7 367 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 GcP21614 476 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Igsf9Q05BQ1 1179 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Rnf180Q3U827 592 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gm29609Q3UU56 907 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Cntn2Q61330 1040 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Pde1aQ61481 565 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Dennd2cQ6P9P8 914 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Olfr698Q7TRN4 311 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Znf598Q80YR4 908 aaKnown RBP11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Znf784Q8BI69 297 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gtf3c2Q8BL74 907 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Irak4Q8R4K2 459 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Trmt10bQ9D075 318 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Pold3Q9EQ28 462 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Rnf14Q9JI90 485 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Kifc1Q9QWT9 674 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tnfsf13bQ9WU72 309 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Pdpk1Q9Z2A0 559 aa11.16□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gucy2dA0A0U1RPR8 1117 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Rhox3cA2AWM0 215 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Akap5D3YVF0 745 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Kif6E9PX57 802 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Fbxl18E9PYR1 771 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Rhox3hL7MU37 215 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 PtprcP06800 1291 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Dpep1P31428 410 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Mmp13P33435 472 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Nploc4P60670 608 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 YwhazP63101 245 aaKnown RBP11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 VcpQ01853 806 aaKnown RBP11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Sppl2bQ3TD49 578 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Smyd5Q3TYX3 416 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Rhox3aQ4TU90 215 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Arl5cQ6P068 179 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 DgkqQ6P5E8 934 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Chsy1Q6ZQ11 800 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Psd4Q8BLR5 1005 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Taf5Q8C092 801 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 PygbQ8CI94 843 aaKnown RBP11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Atpaf2Q91YY4 289 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Dis3Q9CSH3 958 aaKnown RBP11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 QpctQ9CYK2 362 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Atp6ap2Q9CYN9 350 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Klhl35Q9CZ49 574 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 SrcapA0A087WQ44 3271 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 NinQ61043 2035 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ankfn1A0A140LIW7 1083 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Plekhg4A0A1L1SU27 1217 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Mroh4G3X8W1 983 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 AlbP07724 608 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ap2a2P17427 938 aaKnown RBP11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Nr2c2P49117 596 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Trmt10cQ3UFY8 414 aaKnown RBP11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Arhgap17Q3UIA2 846 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 PostnQ62009 838 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gja6Q6S5G4 283 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Q8BHN7 327 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Snx17Q8BVL3 470 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Dcun1d2Q8BZJ7 259 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Clip4Q8CI96 704 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Mospd1Q8VEL0 213 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Olfr356Q8VFP5 315 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Epn3Q91W69 636 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Chst12Q99LL3 419 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Katnal2Q9D3R6 539 aa11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ppp1r12aQ9DBR7 1029 aaKnown RBP11.15□□□□□ -0.62
Msh3-201ENSMUST00000022220 Myh11O08638 1972 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fam71e2L7N480 754 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pitpnm1O35954 1243 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pold1P52431 1105 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Scarf2P59222 833 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Il6stQ00560 917 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ugt3a1Q3UP75 523 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Q3UTZ3 580 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ttc9Q3V038 219 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tmem237Q3V0J1 427 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Casc4Q6P2L7 435 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm7247Q6UY52 187 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Krt75Q8BGZ7 551 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tbl3Q8C4J7 801 aaKnown RBP11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Olfr449Q8VGW8 311 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ttc30a1Q99J38 664 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kat2bQ9JHD1 813 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 IvdQ9JHI5 424 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Trpm5Q9JJH7 1158 aa11.15□□□□□ -0.63
Msh3-201ENSMUST00000022220 Olfr1023A2ASU6 311 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Supt3B0QZW4 406 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm8444F6XS56 118 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Chrna1P04756 457 aa11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms