RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Rps6kc1Q8BLK9 1056 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Rsl1d1Q8BVY0 452 aaKnown RBP20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Clec1aQ8BWY2 269 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Uba6Q8C7R4 1053 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tm9sf1Q9DBU0 606 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Epm2aQ9WUA5 330 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Dock1Q8BUR4 1865 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Arhgap42B2RQE8 841 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Nedd9O35177 833 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Edil3O35474 480 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ppargc1aO70343 797 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 P04214 136 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 AlplP09242 524 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Zbtb14Q08376 449 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Q3TQQ9 903 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Rbm20Q3UQS8 1199 aaKnown RBP20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Grm6Q5NCH9 871 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Scube3Q66PY1 993 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Sh3rf1Q69ZI1 892 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Olfr538Q7TRT5 310 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Snx30Q8CE50 437 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Trim60Q8VI40 466 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Znf24Q91VN1 368 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tceal1Q921P9 165 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tomm20lQ9D4V6 152 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Trpv2Q9WTR1 756 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Kif9Q9WV04 790 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 MycsQ9Z304 431 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Plin4O88492 1403 aa20.98■□□□□ 0.95
Trim47-201ENSMUST00000021120 Zscan4-ps1A0A1C7CYV3 506 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Zscan4dA7KBS4 506 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Krt90E9Q1Z0 538 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 BC049352E9Q2Z6 85 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Gm5160F8VPN3 147 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Dnase1l3O55070 310 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Zfp42P22227 288 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Mxi1P50540 228 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Zscan4fQ3URS2 506 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ssxb5Q6XAS2 159 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Olfr212Q7TS33 327 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Zscan4cQ80VJ6 506 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Eif2aQ8BJW6 581 aaKnown RBP20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Rd3Q8BRE0 195 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 GancQ8BVW0 898 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Gpc5Q8CAL5 572 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Lrif1Q8CDD9 755 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tada2aQ8CHV6 443 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ace2Q8R0I0 805 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tbc1d22aQ8R5A6 516 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Spred2Q924S7 410 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Rpa3Q9CQ71 121 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Acbd6Q9D061 282 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ddx24Q9ESV0 857 aaKnown RBP20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Mocs3A2BDX3 460 aaKnown RBP20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Adcy6Q01341 1165 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tcf4Q60722 670 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ugt2b1Q8R084 529 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Dhx36Q8VHK9 1001 aaKnown RBP20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Pip4k2cQ91XU3 421 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Noxred1Q9D3S5 366 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 1700013H16RikQ9DAC5 291 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Rdh14Q9ERI6 334 aa20.97■□□□□ 0.95
Trim47-201ENSMUST00000021120 Lrriq4A6H6A4 596 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Gm11239E9Q5Z9 360 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Gm11237F2Z3W5 360 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Gm11238F2Z478 360 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 PfkmP47857 780 aaKnown RBP20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 DmwdQ08274 665 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Znf112Q0VAW7 879 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Gm428Q3UTE2 360 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Crtc1Q68ED7 630 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Glra2Q7TNC8 452 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Crb2Q80YA8 1282 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Zbtb9Q8CDC7 459 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 4921504E06RikQ8CET2 560 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Mcoln2Q8K595 566 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Cys1Q8R4T1 145 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Pex19Q8VCI5 299 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Cwh43Q91YL7 699 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Jph2Q9ET78 696 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 XkQ9QXY7 446 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 4930402K13RikB1AW18 415 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ldlrad1D3YYZ1 218 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Pbx3O35317 434 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Art2bO35975 289 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Mmp13P33435 472 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Rab20P35295 233 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 ClgnP52194 611 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 YwhahP68510 246 aaKnown RBP20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Cpne7Q0VE82 557 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Aarsd1Q3THG9 412 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Spa17Q62252 149 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 PtprjQ64455 1238 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Chn2Q80XD1 332 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Neto2Q8BNJ6 525 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Arhgap24Q8C4V1 747 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Zfp263Q8CF60 680 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Ugt3a2Q8JZZ0 523 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Tbc1d19Q8VDV7 526 aa20.96■□□□□ 0.95
Trim47-201ENSMUST00000021120 Spns2Q91VM4 549 aa20.96■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms