RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	TAF5	Q15542	800 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	LPAL2	Q16609	132 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	KLHL40	Q2TBA0	621 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	PTPN20	Q4JDL3	420 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	EFHC1	Q5JVL4	640 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	EGFLAM	Q63HQ2	1017 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	OR6B2	Q6IFH4	312 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	FAM183BP	Q6ZVS7	135 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	APTX	Q7Z2E3	356 aa	Known RBP	15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	TAC4	Q86UU9	113 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	DCLK2	Q8N568	766 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	ADAM32	Q8TC27	787 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	IPO4	Q8TEX9	1081 aa	Known RBP	15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	TMA16	Q96EY4	203 aa	Known RBP	15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	PIWIL1	Q96J94	861 aa	Known RBP	15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	FCRL2	Q96LA5	508 aa	Predicted RBP	15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	PCMTD1	Q96MG8	357 aa	Predicted RBP	15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	SYNC	Q9H7C4	482 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	POLM	Q9NP87	494 aa	Predicted RBP	15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	GMEB2	Q9UKD1	530 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	HCN2	Q9UL51	889 aa		15.64	■□□□□ 0.09
PHGDH-231	ENST00000641939	PLXND1	Q9Y4D7	1925 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	SMTNL1	A8MU46	457 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	EPHB6	O15197	1021 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	ACSL4	O60488	711 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	HSF2BP	O75031	334 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	TRUB2	O95900	331 aa	Known RBP	15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	ERBB2	P04626	1255 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	ATP1A3	P13637	1013 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	HNRNPL	P14866	589 aa	Known RBP eCLIP	15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	HOXD9	P28356	352 aa	Predicted RBP	15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	NTSR1	P30989	418 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	JAM2	P57087	298 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	DCAF6	Q58WW2	860 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	FAM133B	Q5BKY9	247 aa	Known RBP	15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	TAF3	Q5VWG9	929 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	ANO7	Q6IWH7	933 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	OLFML1	Q6UWY5	402 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	CACNA2D4	Q7Z3S7	1137 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	ANKS1B	Q7Z6G8	1248 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	NOP9	Q86U38	636 aa	Known RBP	15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	RASSF3	Q86WH2	238 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	DHX40	Q8IX18	779 aa	Known RBP	15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	NEK11	Q8NG66	645 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	DDX1	Q92499	740 aa	Known RBP	15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	SLC39A13	Q96H72	371 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	SLC2A13	Q96QE2	648 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	ERGIC2	Q96RQ1	377 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	IRX2	Q9BZI1	471 aa	Predicted RBP	15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	NLRC4	Q9NPP4	1024 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	CLEC4E	Q9ULY5	219 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	GON4L	Q3T8J9	2241 aa		15.63	■□□□□ 0.09
PHGDH-231	ENST00000641939	NUP205	Q92621	2012 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	IRAK2	O43187	625 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	GRAP2	O75791	330 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	GFPT2	O94808	682 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	LSM8	O95777	96 aa	Known RBP	15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	IGLV3-25	P01717	112 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	RET	P07949	1114 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	PTMS	P20962	102 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	SOX5	P35711	763 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	CDK17	Q00537	523 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	SLC6A3	Q01959	620 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	GEN1	Q17RS7	908 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	PIK3R6	Q5UE93	754 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	NADSYN1	Q6IA69	706 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	SDE2	Q6IQ49	451 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	RFWD3	Q6PCD5	774 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	ZNF677	Q86XU0	584 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	ZDHHC17	Q8IUH5	632 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	CHPF	Q8IZ52	775 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	DEFB106A	Q8N104	65 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	FAM160A2	Q8N612	972 aa	Predicted RBP	15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	MDGA1	Q8NFP4	955 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	EPS8L1	Q8TE68	723 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	SPAG5	Q96R06	1193 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	DDX50	Q9BQ39	737 aa	Known RBP	15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	TPSD1	Q9BZJ3	242 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	DMXL1	Q9Y485	3027 aa		15.62	■□□□□ 0.09
PHGDH-231	ENST00000641939	CKAP5	Q14008	2032 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	CEP192	Q8TEP8	1941 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	GOLGA6L7	A0A1B0GV03	622 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	MOCS2	O96007	188 aa	Predicted RBP	15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	APOE	P02649	317 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	MME	P08473	750 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	HOXB2	P14652	356 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	SLC6A4	P31645	630 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	GBP1	P32455	592 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	STAT1	P42224	750 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	WAS	P42768	502 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	GABRB2	P47870	512 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	ZNF165	P49910	485 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	SGSH	P51688	502 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	PITX1	P78337	314 aa	Predicted RBP	15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	USP39	Q53GS9	565 aa	Known RBP	15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	ZC3H12A	Q5D1E8	599 aa	Known RBP	15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	MPP7	Q5T2T1	576 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	SLC26A9	Q7LBE3	791 aa		15.61	■□□□□ 0.09
PHGDH-231	ENST00000641939	KBTBD6	Q86V97	674 aa		15.61	■□□□□ 0.09

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms