RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 XAB2Q9HCS7 855 aaKnown RBP17.63■□□□□ 0.41
PHGDH-211ENST00000641213 CHST12Q9NRB3 414 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 TIMM13Q9Y5L4 95 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-211ENST00000641213 SHROOM3Q8TF72 1996 aa17.63■□□□□ 0.41
PHGDH-211ENST00000641213 CFAP73A6NFT4 308 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 TRIM49D1C9J1S8 452 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 HGSO14964 777 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-211ENST00000641213 FBXO21O94952 628 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 ELF3P78545 371 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-211ENST00000641213 PRKD1Q15139 912 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-211ENST00000641213 RSPH3Q86UC2 560 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 FAM35AQ86V20 835 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 PARP9Q8IXQ6 854 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 HACE1Q8IYU2 909 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 NETO2Q8NC67 525 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 RNF169Q8NCN4 708 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 TRIM56Q9BRZ2 755 aaKnown RBP17.62■□□□□ 0.41
PHGDH-211ENST00000641213 ZFYVE28Q9HCC9 887 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 MAD1L1Q9Y6D9 718 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 USH1CQ9Y6N9 552 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 NUP205Q92621 2012 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 MYBPHLA2RUH7 354 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 ARL5CA6NH57 179 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 CREB3O43889 395 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 AP1G2O75843 785 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 DHRS4L1P0CG22 281 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 FDFT1P37268 417 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 ETV4P43268 484 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 DAOAP59103 153 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 GPRIN1Q7Z2K8 1008 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 TBC1D1Q86TI0 1168 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-211ENST00000641213 ZMIZ2Q8NF64 920 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 PCED1BQ96HM7 432 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 KCNK16Q96T55 309 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 TMEM30AQ9NV96 361 aa17.62■□□□□ 0.41
PHGDH-211ENST00000641213 PTPRDP23468 1912 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 SF3B1O75533 1304 aaKnown RBP eCLIP17.61■□□□□ 0.413e-6■■■■■ 100.2
PHGDH-211ENST00000641213 YJEFN3A6XGL0 299 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 E7ENQ6 273 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 MGRN1O60291 552 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 UGT1A9O60656 530 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 KRT37O76014 449 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 PGK1P00558 417 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 SNRPAP09012 282 aaKnown RBP17.61■□□□□ 0.41
PHGDH-211ENST00000641213 CYBAP13498 195 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 CACNA2D1P54289 1103 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 AP1B1Q10567 949 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 DPYSQ14117 519 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 DSTYKQ6XUX3 929 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 AGMOQ6ZNB7 445 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 COLGALT1Q8NBJ5 622 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 GSDMBQ8TAX9 411 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 SLC7A14Q8TBB6 771 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 C10orf82Q8WW14 230 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 P2RY11Q96G91 374 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 MANSC1Q9H8J5 431 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 UGT1A7Q9HAW7 530 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 UGT1A10Q9HAW8 530 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 UGT1A8Q9HAW9 530 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 PCDHA11Q9Y5I1 949 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 CENPFP49454 3210 aa17.61■□□□□ 0.41
PHGDH-211ENST00000641213 F5H423 210 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-211ENST00000641213 RNF103O00237 685 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 EEF2KO00418 725 aaKnown RBP17.6■□□□□ 0.41
PHGDH-211ENST00000641213 GLUD2P49448 558 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 SCNN1GP51170 649 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 CRHR2Q13324 411 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 PAFAH1B3Q15102 231 aaKnown RBP17.6■□□□□ 0.41
PHGDH-211ENST00000641213 RAB41Q5JT25 222 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 RGMBQ6NW40 437 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 TRMT10BQ6PF06 316 aaKnown RBP17.6■□□□□ 0.41
PHGDH-211ENST00000641213 SERINC5Q86VE9 423 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 FAM111AQ96PZ2 611 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 PAAF1Q9BRP4 392 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 MYLK2Q9H1R3 596 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 CHKBQ9Y259 395 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 GIT1Q9Y2X7 761 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 FAM159BA6NKW6 160 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 CAPN9O14815 690 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 CSH1P0DML2 217 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 CSH2P0DML3 217 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 ADRA1BP35368 520 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 SARNPP82979 210 aaKnown RBP17.6■□□□□ 0.41
PHGDH-211ENST00000641213 CDK16Q00536 496 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 MGAT3Q09327 533 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 PDK1Q15118 436 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 LGSNQ5TDP6 509 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 RFX8Q6ZV50 586 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 CHSY1Q86X52 802 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 ADAM32Q8TC27 787 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 PTPRN2Q92932 1015 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 SLC9A7Q96T83 725 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 AGO3Q9H9G7 860 aaKnown RBP17.6■□□□□ 0.41
PHGDH-211ENST00000641213 WDR6Q9NNW5 1121 aaKnown RBP17.6■□□□□ 0.41
PHGDH-211ENST00000641213 ALG13Q9NP73 1137 aaKnown RBP17.6■□□□□ 0.41
PHGDH-211ENST00000641213 CNGB3Q9NQW8 809 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 CDH9Q9ULB4 789 aa17.6■□□□□ 0.41
PHGDH-211ENST00000641213 CASTOR2A6NHX0 329 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 C9IYK1 514 aa17.59■□□□□ 0.41
PHGDH-211ENST00000641213 FAM72CH0Y354 149 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms