RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 SERPINB11Q96P15 392 aa26.25■■□□□ 1.79
VEGFA-232ENST00000640653 IRX2Q9BZI1 471 aaPredicted RBP26.25■■□□□ 1.79
VEGFA-232ENST00000640653 NDST4Q9H3R1 872 aa26.25■■□□□ 1.79
VEGFA-232ENST00000640653 CD248Q9HCU0 757 aa26.25■■□□□ 1.79
VEGFA-232ENST00000640653 ACP6Q9NPH0 428 aa26.25■■□□□ 1.79
VEGFA-232ENST00000640653 ELOVL2Q9NXB9 296 aa26.25■■□□□ 1.79
VEGFA-232ENST00000640653 THAP10Q9P2Z0 257 aaPredicted RBP26.25■■□□□ 1.79
VEGFA-232ENST00000640653 CLEC4EQ9ULY5 219 aa26.25■■□□□ 1.79
VEGFA-232ENST00000640653 RAD54BQ9Y620 910 aa26.25■■□□□ 1.79
VEGFA-232ENST00000640653 STON1Q9Y6Q2 735 aa26.25■■□□□ 1.79
VEGFA-232ENST00000640653 DCDC2BA2VCK2 349 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 TIMM44O43615 452 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 ZNF217O75362 1048 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 NDUFV2P19404 249 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 VWA3BQ502W6 1294 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 IL31Q6EBC2 164 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 KIAA1211LQ6NV74 962 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 SLC36A4Q6YBV0 504 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 BEND5Q7L4P6 421 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 TMEM110Q86TL2 294 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 DQX1Q8TE96 717 aaKnown RBP26.24■■□□□ 1.79
VEGFA-232ENST00000640653 AZIN2Q96A70 460 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 GBP4Q96PP9 640 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 TUBGCP2Q9BSJ2 902 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 CIPCQ9C0C6 399 aa26.24■■□□□ 1.79
VEGFA-232ENST00000640653 MBD1Q9UIS9 605 aaPredicted RBP26.24■■□□□ 1.79
VEGFA-232ENST00000640653 WASH3PC4AMC7 463 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 E5RJQ4 531 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 CAPN9O14815 690 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 IRAK2O43187 625 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 FYNP06241 537 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 ARID5AQ03989 594 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 PTK2Q05397 1052 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 PDCLQ13371 301 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 FRMD1Q8N878 549 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 DDX50Q9BQ39 737 aaKnown RBP26.23■■□□□ 1.79
VEGFA-232ENST00000640653 CYTH4Q9UIA0 394 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 DNAJC12Q9UKB3 198 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 NAALADL1Q9UQQ1 740 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 TLR6Q9Y2C9 796 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 CEP250Q9BV73 2442 aa26.23■■□□□ 1.79
VEGFA-232ENST00000640653 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.22■■□□□ 1.79
VEGFA-232ENST00000640653 MED19A0JLT2 244 aaPredicted RBP26.22■■□□□ 1.79
VEGFA-232ENST00000640653 PAPSS1O43252 624 aaPredicted RBP26.22■■□□□ 1.79
VEGFA-232ENST00000640653 AP5Z1O43299 807 aa26.22■■□□□ 1.79
VEGFA-232ENST00000640653 ACSL4O60488 711 aa26.22■■□□□ 1.79
VEGFA-232ENST00000640653 IL12RB1P42701 662 aa26.22■■□□□ 1.79
VEGFA-232ENST00000640653 HSP90AA4PQ58FG1 418 aa26.22■■□□□ 1.79
VEGFA-232ENST00000640653 TCEAL6Q6IPX3 200 aa26.22■■□□□ 1.79
VEGFA-232ENST00000640653 TMEFF1Q8IYR6 380 aa26.22■■□□□ 1.79
VEGFA-232ENST00000640653 WFIKKN2Q8TEU8 576 aa26.22■■□□□ 1.79
VEGFA-232ENST00000640653 DDX1Q92499 740 aaKnown RBP26.22■■□□□ 1.79
VEGFA-232ENST00000640653 TCEAL3Q969E4 200 aa26.22■■□□□ 1.79
VEGFA-232ENST00000640653 ERLEC1Q96DZ1 483 aa26.22■■□□□ 1.79
VEGFA-232ENST00000640653 POPDC2Q9HBU9 364 aa26.22■■□□□ 1.79
VEGFA-232ENST00000640653 SIX2Q9NPC8 291 aa26.22■■□□□ 1.79
VEGFA-232ENST00000640653 PCDHGC3Q9UN70 934 aa26.22■■□□□ 1.79
VEGFA-232ENST00000640653 MYO18AQ92614 2054 aaKnown RBP26.22■■□□□ 1.79
VEGFA-232ENST00000640653 KHNYNO15037 678 aaKnown RBP26.21■■□□□ 1.79
VEGFA-232ENST00000640653 SYNCRIPO60506 623 aaKnown RBP26.21■■□□□ 1.79
VEGFA-232ENST00000640653 DPP6P42658 865 aa26.21■■□□□ 1.79
VEGFA-232ENST00000640653 ENPP2Q13822 863 aa26.21■■□□□ 1.79
VEGFA-232ENST00000640653 MIIPQ5JXC2 388 aa26.21■■□□□ 1.79
VEGFA-232ENST00000640653 MPP7Q5T2T1 576 aa26.21■■□□□ 1.79
VEGFA-232ENST00000640653 PIK3R6Q5UE93 754 aa26.21■■□□□ 1.79
VEGFA-232ENST00000640653 ZNF557Q8N988 423 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-232ENST00000640653 PIGKQ92643 395 aa26.21■■□□□ 1.79
VEGFA-232ENST00000640653 FCRL2Q96LA5 508 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-232ENST00000640653 MRGPRX1Q96LB2 322 aa26.21■■□□□ 1.79
VEGFA-232ENST00000640653 NOX5Q96PH1 765 aa26.21■■□□□ 1.79
VEGFA-232ENST00000640653 RXFP3Q9NSD7 469 aa26.21■■□□□ 1.79
VEGFA-232ENST00000640653 TYW5A2RUC4 315 aaKnown RBP26.2■■□□□ 1.78
VEGFA-232ENST00000640653 KCNJ18B7U540 433 aa26.2■■□□□ 1.78
VEGFA-232ENST00000640653 PES1O00541 588 aaKnown RBP26.2■■□□□ 1.78
VEGFA-232ENST00000640653 HLA-FP30511 346 aa26.2■■□□□ 1.78
VEGFA-232ENST00000640653 YWHAZP63104 245 aaKnown RBP26.2■■□□□ 1.78
VEGFA-232ENST00000640653 RPL6Q02878 288 aaKnown RBP26.2■■□□□ 1.78
VEGFA-232ENST00000640653 KCNJ12Q14500 433 aa26.2■■□□□ 1.78
VEGFA-232ENST00000640653 ZNF234Q14588 700 aa26.2■■□□□ 1.78
VEGFA-232ENST00000640653 FAM133BQ5BKY9 247 aaKnown RBP26.2■■□□□ 1.78
VEGFA-232ENST00000640653 STPG1Q5TH74 334 aa26.2■■□□□ 1.78
VEGFA-232ENST00000640653 LYSMD4Q5XG99 296 aa26.2■■□□□ 1.78
VEGFA-232ENST00000640653 RFWD3Q6PCD5 774 aa26.2■■□□□ 1.78
VEGFA-232ENST00000640653 ARMCX6Q7L4S7 300 aa26.2■■□□□ 1.78
VEGFA-232ENST00000640653 EDEM2Q9BV94 578 aa26.2■■□□□ 1.78
VEGFA-232ENST00000640653 AJAP1Q9UKB5 411 aaPredicted RBP26.2■■□□□ 1.78
VEGFA-232ENST00000640653 CYP8B1Q9UNU6 501 aa26.2■■□□□ 1.78
VEGFA-232ENST00000640653 PLXND1Q9Y4D7 1925 aa26.2■■□□□ 1.78
VEGFA-232ENST00000640653 THADAQ6YHU6 1953 aa26.19■■□□□ 1.78
VEGFA-232ENST00000640653 GOLGA6L7A0A1B0GV03 622 aa26.19■■□□□ 1.78
VEGFA-232ENST00000640653 TBL1XO60907 577 aa26.19■■□□□ 1.78
VEGFA-232ENST00000640653 SGSHP51688 502 aa26.19■■□□□ 1.78
VEGFA-232ENST00000640653 FUT11Q495W5 492 aa26.19■■□□□ 1.78
VEGFA-232ENST00000640653 SYPL2Q5VXT5 272 aa26.19■■□□□ 1.78
VEGFA-232ENST00000640653 TMEM215Q68D42 235 aa26.19■■□□□ 1.78
VEGFA-232ENST00000640653 RNF43Q68DV7 783 aa26.19■■□□□ 1.78
VEGFA-232ENST00000640653 KIAA1324Q6UXG2 1013 aaKnown RBP26.19■■□□□ 1.78
VEGFA-232ENST00000640653 TAC4Q86UU9 113 aa26.19■■□□□ 1.78
VEGFA-232ENST00000640653 PASD1Q8IV76 773 aa26.19■■□□□ 1.78
VEGFA-232ENST00000640653 AHI1Q8N157 1196 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms