RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 NUAK2Q9H093 628 aa6.36□□□□□ -1.39
RTTN-217ENST00000640393 ELAC1Q9H777 363 aaKnown RBP6.36□□□□□ -1.39
RTTN-217ENST00000640393 ASNSD1Q9NWL6 643 aa6.36□□□□□ -1.39
RTTN-217ENST00000640393 TRPC5Q9UL62 973 aaPredicted RBP6.36□□□□□ -1.39
RTTN-217ENST00000640393 MORC2Q9Y6X9 1032 aaPredicted RBP6.36□□□□□ -1.39
RTTN-217ENST00000640393 LINC01548A6NM66 108 aa6.35□□□□□ -1.39
RTTN-217ENST00000640393 C16orf96A6NNT2 1141 aa6.35□□□□□ -1.39
RTTN-217ENST00000640393 RBMXL2O75526 392 aaKnown RBP6.35□□□□□ -1.39
RTTN-217ENST00000640393 CHRM5P08912 532 aaPredicted RBP6.35□□□□□ -1.39
RTTN-217ENST00000640393 DUSP1P28562 367 aa6.35□□□□□ -1.39
RTTN-217ENST00000640393 HALP42357 657 aa6.35□□□□□ -1.39
RTTN-217ENST00000640393 SF3A3Q12874 501 aaKnown RBP eCLIP6.35□□□□□ -1.39
RTTN-217ENST00000640393 LIN54Q6MZP7 749 aa6.35□□□□□ -1.39
RTTN-217ENST00000640393 JMJD6Q6NYC1 403 aaPredicted RBP6.35□□□□□ -1.39
RTTN-217ENST00000640393 ZNF66Q6ZN08 573 aa6.35□□□□□ -1.39
RTTN-217ENST00000640393 CNGA4Q8IV77 575 aa6.35□□□□□ -1.39
RTTN-217ENST00000640393 OR52L2PQ8NGH6 319 aa6.35□□□□□ -1.39
RTTN-217ENST00000640393 FAR2Q96K12 515 aa6.35□□□□□ -1.39
RTTN-217ENST00000640393 TAF1DQ9H5J8 278 aaPredicted RBP6.35□□□□□ -1.39
RTTN-217ENST00000640393 KLHL13Q9P2N7 655 aa6.35□□□□□ -1.39
RTTN-217ENST00000640393 CNTN6Q9UQ52 1028 aa6.35□□□□□ -1.39
RTTN-217ENST00000640393 IFRD1O00458 451 aaPredicted RBP6.34□□□□□ -1.39
RTTN-217ENST00000640393 CD38P28907 300 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 STAT6P42226 847 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 NHLH1Q02575 133 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 POSTNQ15063 836 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 SEC23BQ15437 767 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 TAF5Q15542 800 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 AAK1Q2M2I8 961 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 C4orf46Q504U0 113 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 PTF1AQ7RTS3 328 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 SLC44A2Q8IWA5 706 aaPredicted RBP6.34□□□□□ -1.39
RTTN-217ENST00000640393 OSR1Q8TAX0 266 aaPredicted RBP6.34□□□□□ -1.39
RTTN-217ENST00000640393 CSGALNACT1Q8TDX6 532 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 NTN5Q8WTR8 489 aaPredicted RBP6.34□□□□□ -1.39
RTTN-217ENST00000640393 EID2BQ96D98 161 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 TRAPPC9Q96Q05 1148 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 FAM167BQ9BTA0 163 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 VPS16Q9H269 839 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 PABPC3Q9H361 631 aaKnown RBP6.34□□□□□ -1.39
RTTN-217ENST00000640393 CDCP1Q9H5V8 836 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 DAPP1Q9UN19 280 aa6.34□□□□□ -1.39
RTTN-217ENST00000640393 UBE2J1Q9Y385 318 aaPredicted RBP6.34□□□□□ -1.39
RTTN-217ENST00000640393 WDR17Q8IZU2 1322 aa6.34□□□□□ -1.4
RTTN-217ENST00000640393 TBC1D3DA0A087WVF3 549 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 TBC1D3IA0A087WXS9 549 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 TBC1D3EA0A087X179 549 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 TBC1D3KA0A087X1G2 549 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 TBC1D3BA6NDS4 549 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 TBC1D3FA6NER0 549 aaPredicted RBP6.33□□□□□ -1.4
RTTN-217ENST00000640393 TBC1D3LB9A6J9 549 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 IPO5O00410 1097 aaKnown RBP6.33□□□□□ -1.4
RTTN-217ENST00000640393 PRYO14603 147 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 KRT38O76015 456 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 RNF8O76064 485 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 KAT7O95251 611 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 TBC1D3HP0C7X1 549 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 SLC8A1P32418 973 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 ARHGAP25P42331 645 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 PNLIPRP1P54315 467 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 ZNF268Q14587 947 aaPredicted RBP6.33□□□□□ -1.4
RTTN-217ENST00000640393 KRT72Q14CN4 511 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 TBC1D3GQ6DHY5 549 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 TBC1D3CQ6IPX1 549 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 SYNE3Q6ZMZ3 975 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 TBC1D3Q8IZP1 549 aaPredicted RBP6.33□□□□□ -1.4
RTTN-217ENST00000640393 ANKRD42Q8N9B4 389 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 C8orf58Q8NAV2 365 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 ZNF764Q96H86 408 aaPredicted RBP6.33□□□□□ -1.4
RTTN-217ENST00000640393 HIC2Q96JB3 615 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 PAAF1Q9BRP4 392 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 PRDM16Q9HAZ2 1276 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 B3GNT3Q9Y2A9 372 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 PCDHA10Q9Y5I2 948 aa6.33□□□□□ -1.4
RTTN-217ENST00000640393 LOC105369274A0A096LPK9 316 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 LOC102723532A0A0G2JNH3 316 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 FAM90A18PA6NE21 464 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 FAM90A16PA6NEW6 464 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 AGAP5A6NIR3 686 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 FAM90A9PA6NNJ1 464 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 FAM90A5PA8MXJ8 464 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 PIP5K1CO60331 668 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 FAM90A15PP0C7V4 464 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 FAM90A14PP0C7W9 464 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 MATN1P21941 496 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 GRK5P34947 590 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 POLE2P56282 527 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 FAM3BP58499 235 aaPredicted RBP6.32□□□□□ -1.4
RTTN-217ENST00000640393 RPL15P61313 204 aaKnown RBP6.32□□□□□ -1.4
RTTN-217ENST00000640393 YPEL5P62699 121 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 SLC10A2Q12908 348 aaPredicted RBP6.32□□□□□ -1.4
RTTN-217ENST00000640393 PRKG1Q13976 671 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 TMEM63BQ5T3F8 832 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 WDR93Q6P2C0 686 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 OR4N4Q8N0Y3 316 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 STT3BQ8TCJ2 826 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 MORC4Q8TE76 937 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 PNISRQ8TF01 805 aaKnown RBP6.32□□□□□ -1.4
RTTN-217ENST00000640393 GLMPQ8WWB7 406 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 CELF1Q92879 486 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms