RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 FUKQ8N0W3 1084 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 WDTC1Q8N5D0 677 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 TMEM35BQ8NCS4 154 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 SLC2A14Q8TDB8 520 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 CPA5Q8WXQ8 436 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 PPP1R13BQ96KQ4 1090 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 TMEM209Q96SK2 561 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 PKMYT1Q99640 499 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 HNRNPABQ99729 332 aaKnown RBP8.36□□□□□ -1.07
SCARB2-220ENST00000640076 TTPALQ9BTX7 342 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 PACSIN1Q9BY11 444 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 ZNF518BQ9C0D4 1074 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 PRDM4Q9UKN5 801 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 GTF3C4Q9UKN8 822 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 CEP83Q9Y592 693 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 PCDHB12Q9Y5F1 795 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 GBF1Q92538 1859 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 ATP8B3O60423 1300 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 PTPRDP23468 1912 aa8.36□□□□□ -1.07
SCARB2-220ENST00000640076 NLRC5Q86WI3 1866 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 PJA2O43164 708 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 CCP110O43303 1012 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 SNX2O60749 519 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 MMP20O60882 483 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 MT-CO1P00395 513 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 SOD2P04179 222 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 H2AFZP0C0S5 128 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 PABPC1P11940 636 aaKnown RBP8.35□□□□□ -1.07
SCARB2-220ENST00000640076 ARHGAP25P42331 645 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 GPD2P43304 727 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 NSFP46459 744 aaKnown RBP8.35□□□□□ -1.07
SCARB2-220ENST00000640076 GALCP54803 685 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 TSPY1Q01534 308 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 PCBP2Q15366 365 aaKnown RBP eCLIP8.35□□□□□ -1.07
SCARB2-220ENST00000640076 USP41Q3LFD5 358 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 HEATR6Q6AI08 1181 aaKnown RBP8.35□□□□□ -1.07
SCARB2-220ENST00000640076 FAM109BQ6ICB4 259 aaPredicted RBP8.35□□□□□ -1.07
SCARB2-220ENST00000640076 PAQR9Q6ZVX9 377 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 H2AFVQ71UI9 128 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 ANKRD52Q8NB46 1076 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 UBA3Q8TBC4 463 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 MYCBPAPQ8TBZ2 947 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 GRIN3AQ8TCU5 1115 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 PCED1BQ96HM7 432 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 UBE2OQ9C0C9 1292 aaKnown RBP8.35□□□□□ -1.07
SCARB2-220ENST00000640076 CHST7Q9NS84 486 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 GMIPQ9P107 970 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 CYTH4Q9UIA0 394 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 MYO7AQ13402 2215 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 LINC01553A4QN01 128 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 GOLGA6L9A6NEM1 432 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 OR6C75A6NL08 312 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 GRXCR1A8MXD5 290 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 H7C4K7 107 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 CLDN5O00501 218 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 TNFRSF10CO14798 259 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 TBC1D4O60343 1298 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 SASH3O75995 380 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 FGF18O76093 207 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 ABCB4P21439 1286 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 MMP8P22894 467 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 ADORA2BP29275 332 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 KIF5AQ12840 1032 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 TAF11Q15544 211 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 CTXN3Q4LDR2 81 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 PPP1R2P3Q6NXS1 205 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 Q6ZVU0 165 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 DDX53Q86TM3 631 aaKnown RBP8.35□□□□□ -1.07
SCARB2-220ENST00000640076 RASSF3Q86WH2 238 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 PHF13Q86YI8 300 aaPredicted RBP8.35□□□□□ -1.07
SCARB2-220ENST00000640076 ZNF687Q8N1G0 1237 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 TXLNBQ8N3L3 684 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 MYLPFQ96A32 169 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 HERC2P3Q9BVR0 1158 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 B3GNT5Q9BYG0 378 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 ZCWPW1Q9H0M4 648 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 THAP2Q9H0W7 228 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 CD248Q9HCU0 757 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 LZTFL1Q9NQ48 299 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 TMLHEQ9NVH6 421 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 HESX1Q9UBX0 185 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 TRIM10Q9UDY6 481 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 TMCC3Q9ULS5 477 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 DUSP10Q9Y6W6 482 aa8.35□□□□□ -1.07
SCARB2-220ENST00000640076 SIAH2O43255 324 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 ARHGEF15O94989 841 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 OR4Q2P0C623 313 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 TMEM253P0C7T8 217 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 MYOGP15173 224 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 NAT1P18440 290 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 BMPR1AP36894 532 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 GLUD2P49448 558 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 CDR1P51861 262 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 BCAT1P54687 386 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 KRT17Q04695 432 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 BST2Q10589 180 aaKnown RBP8.34□□□□□ -1.07
SCARB2-220ENST00000640076 PTP4A2Q12974 167 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 PDCLQ13371 301 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 TUBB8Q3ZCM7 444 aa8.34□□□□□ -1.07
SCARB2-220ENST00000640076 PTPN20Q4JDL3 420 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms