RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 GSTM1P09488 218 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 UBTFL1P0CB47 393 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 SRGAP2BP0DMP2 458 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 CRKLP46109 303 aaKnown RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 SLC12A3P55017 1021 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 ABATP80404 500 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 LEXMQ3ZCV2 418 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 C12orf60Q5U649 245 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 C1orf146Q5VVC0 180 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 KANK2Q63ZY3 851 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 SEZ6L2Q6UXD5 910 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 FITM2Q8N6M3 262 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 C7orf31Q8N865 590 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 MFSD2AQ8NA29 543 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 ZNF248Q8NDW4 579 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 TRPM4Q8TD43 1214 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 SLC26A7Q8TE54 656 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 ZUFSPQ96AP4 578 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 LRRC39Q96DD0 335 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 FAR2Q96K12 515 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 UHRF1Q96T88 793 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 C17orf80Q9BSJ5 609 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 ZNF717Q9BY31 904 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 RNF41Q9H4P4 317 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 KRT84Q9NSB2 600 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 INTS13Q9NVM9 706 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 PI4KBQ9UBF8 816 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 GRHPRQ9UBQ7 328 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 SNX12Q9UMY4 172 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 C19orf53Q9UNZ5 99 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 AURKCQ9UQB9 309 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 APOBEC2Q9Y235 224 aaKnown RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 SLC22A14Q9Y267 594 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 TNFSF13BQ9Y275 285 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 SLC12A7Q9Y666 1083 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 NUMBLQ9Y6R0 609 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 ZMYM6O95789 1325 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 A0A1W2PPH5 198 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 DPYSL4O14531 572 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 MAN1A2O60476 641 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 NOL3O60936 208 aaKnown RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 PSMG1O95456 288 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 CRTAMO95727 393 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 FGF4P08620 206 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 CD46P15529 392 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 NR4A1P22736 598 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 MAP4P27816 1152 aaKnown RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 GTF2H1P32780 548 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 IREB2P48200 963 aaKnown RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 POLGP54098 1239 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 EIF3BP55884 814 aaKnown RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 ZNF280AP59817 542 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 STX1BP61266 288 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 ZNF177Q13360 481 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 PNOCQ13519 176 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 PPP2R5EQ16537 467 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 AOC3Q16853 763 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 LRRC36Q1X8D7 754 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 SMTNL2Q2TAL5 461 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 EDRF1Q3B7T1 1238 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 WDR72Q3MJ13 1102 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 CERKLQ49MI3 558 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 MCMDC2Q4G0Z9 681 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 DEGS2Q6QHC5 323 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 CYP2U1Q7Z449 544 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 KCTD20Q7Z5Y7 419 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 DPP9Q86TI2 863 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 REM2Q8IYK8 340 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 FAM71DQ8N9W8 422 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 UPF1Q92900 1129 aaKnown RBP eCLIP6.31□□□□□ -1.44e-7■■■□□ 15.7
NECAP1-222ENST00000640072 DACH2Q96NX9 599 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 ZNF317Q96PQ6 595 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 PLEKHF1Q96S99 279 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 ECSITQ9BQ95 431 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 UBAC1Q9BSL1 405 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 Q9H521 79 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 SMYD3Q9H7B4 428 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 USP29Q9HBJ7 922 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 RPS6KA6Q9UK32 745 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 KCNH4Q9UQ05 1017 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 PCDHGA11Q9Y5H2 935 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 TRPV2Q9Y5S1 764 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 PDS5AQ29RF7 1337 aaKnown RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 MROH5Q6ZUA9 1318 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 A0A1W2PPL8 197 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 KPNA4O00629 521 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 CLOCKO15516 846 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 PRPSAP2O60256 369 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 DNAJB6O75190 326 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 PLEKHA8P1O95397 391 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 PLEKP08567 350 aaPredicted RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 DBTP11182 482 aaKnown RBP6.31□□□□□ -1.4
NECAP1-222ENST00000640072 ZNF18P17022 549 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 SLC15A1P46059 708 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 CPA2P48052 419 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 TM4SF4P48230 202 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 ATP12AP54707 1039 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 STX17P56962 302 aa6.31□□□□□ -1.4
NECAP1-222ENST00000640072 CDC20Q12834 499 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms