RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 ARTNQ5T4W7 220 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 STPG1Q5TH74 334 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 BSPRYQ5W0U4 402 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 NADSYN1Q6IA69 706 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 GRAMD4Q6IC98 578 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 DENND1CQ8IV53 801 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 FMNL3Q8IVF7 1028 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 TMEFF1Q8IYR6 380 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 SCML4Q8N228 414 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 CPXM2Q8N436 756 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 WDTC1Q8N5D0 677 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 DEFB119Q8N690 84 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 CCDC150Q8NCX0 1101 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 HMGB4Q8WW32 186 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 TSG101Q99816 390 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 SRRTQ9BXP5 876 aaKnown RBP8.2□□□□□ -1.1
PNKP-229ENST00000637897 ADAM33Q9BZ11 813 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 XPO4Q9C0E2 1151 aaKnown RBP8.2□□□□□ -1.1
PNKP-229ENST00000637897 MARCH2Q9P0N8 246 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 CALCOCO1Q9P1Z2 691 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 XPO7Q9UIA9 1087 aaKnown RBP8.2□□□□□ -1.1
PNKP-229ENST00000637897 RWDD2AQ9UIY3 292 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 CDV3Q9UKY7 258 aaKnown RBP8.2□□□□□ -1.1
PNKP-229ENST00000637897 SLC27A6Q9Y2P4 619 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 PCDHGA5Q9Y5G8 931 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 SLCO1B1Q9Y6L6 691 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 ADAMTS9Q9P2N4 1935 aa8.2□□□□□ -1.1
PNKP-229ENST00000637897 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 KCNJ18B7U540 433 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 PSMA7O14818 248 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 P4HA2O15460 535 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 STX10O60499 249 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 ADRB1P08588 477 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 PAEPP09466 180 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 C7P10643 843 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 ATP1A3P13637 1013 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 LCP1P13796 627 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 HOXB2P14652 356 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 CD19P15391 556 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 SLC9A1P19634 815 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 PRKCHP24723 683 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 HLA-FP30511 346 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 NTSR1P30989 418 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 DGKGP49619 791 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 BCAT1P54687 386 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 GCNT1Q02742 428 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 CREB5Q02930 508 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 PAK1Q13153 545 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 TAF5Q15542 800 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 PTPRNQ16849 979 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 TPD52L1Q16890 204 aaPredicted RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 HSF5Q4G112 596 aaPredicted RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 EOGTQ5NDL2 527 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 SYPL2Q5VXT5 272 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 PEAR1Q5VY43 1037 aaPredicted RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 MSANTD2Q6P1R3 559 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 DENND1BQ6P3S1 775 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 ARMCX6Q7L4S7 300 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 KIAA0907Q7Z7F0 614 aaPredicted RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 ADIPOR2Q86V24 386 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 LRRC8AQ8IWT6 810 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 ANKRD20A12PQ8NF67 263 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 KIAA1524Q8TCG1 905 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 KCNV2Q8TDN2 545 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 IPO4Q8TEX9 1081 aaKnown RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 MYO19Q96H55 970 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 SLC39A13Q96H72 371 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 MRGPRX1Q96LB2 322 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 PRICKLE1Q96MT3 831 aaPredicted RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 ZNF830Q96NB3 372 aaPredicted RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 NT5C1BQ96P26 610 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 CRACR2AQ9BSW2 395 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 MKRN2Q9H000 416 aaKnown RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 NACA2Q9H009 215 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 INTS2Q9H0H0 1204 aaKnown RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 KCNF1Q9H3M0 494 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 METTL14Q9HCE5 456 aaKnown RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 VPS45Q9NRW7 570 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 SPTLC3Q9NUV7 552 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 THAP10Q9P2Z0 257 aaPredicted RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 WASF3Q9UPY6 502 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 PCDHB4Q9Y5E5 795 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 FRYQ5TBA9 3013 aa8.19□□□□□ -1.1
PNKP-229ENST00000637897 ATXN2Q99700 1313 aaKnown RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 KMT2BQ9UMN6 2715 aaPredicted RBP8.19□□□□□ -1.1
PNKP-229ENST00000637897 WDFY3Q8IZQ1 3526 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 C4orf47A7E2U8 309 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 C10orf142B7Z368 130 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 PAPSS1O43252 624 aaPredicted RBP8.18□□□□□ -1.1
PNKP-229ENST00000637897 TSPAN3O60637 253 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 TOP3BO95985 862 aaKnown RBP8.18□□□□□ -1.1
PNKP-229ENST00000637897 PNMA6AP0CW24 399 aaPredicted RBP8.18□□□□□ -1.1
PNKP-229ENST00000637897 SETSIPP0DME0 302 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 RALAP11233 206 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 ITPKAP23677 461 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 TBXAS1P24557 533 aaPredicted RBP8.18□□□□□ -1.1
PNKP-229ENST00000637897 PMLP29590 882 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 GBP1P32455 592 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 COPAP53621 1224 aa8.18□□□□□ -1.1
PNKP-229ENST00000637897 COG7P83436 770 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms