RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	CLDN3	O15551	220 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	CYP26A1	O43174	497 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	ARHGAP6	O43182	974 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	PSMD3	O43242	534 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	CHMP2A	O43633	222 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	PRPSAP2	O60256	369 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	KERA	O60938	352 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	MFAP3L	O75121	409 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	AVIL	O75366	819 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	MOSPD3	O75425	235 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	TADA2A	O75478	443 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	RECQL4	O94761	1208 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	ALDH1A2	O94788	518 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	TOMM70	O94826	608 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	SASH1	O94885	1247 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	NXPH3	O95157	252 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	ECEL1	O95672	775 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	MT-ND3	P03897	115 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	HMGCR	P04035	888 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	NTRK1	P04629	796 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	LCK	P06239	509 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	HEXB	P07686	556 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	CHRM4	P08173	479 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	SRPRA	P08240	638 aa	Known RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	VSIG10L2	P0DP72	767 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	GLI4	P10075	376 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	RAP2A	P10114	183 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	MYB	P10242	640 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	PIM1	P11309	404 aa	Predicted RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	KRT3	P12035	628 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	DRD2	P14416	443 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	CPA1	P15085	419 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	VEGFA	P15692	232 aa	Predicted RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	FER	P16591	822 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	DDX5	P17844	614 aa	Known RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	CCNC	P24863	283 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	FPR2	P25090	351 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	GCH1	P30793	250 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	HOXC13	P31276	330 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	HPD	P32754	393 aa	Predicted RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	PCGF2	P35227	344 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	PDE6B	P35913	854 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	IGHMBP2	P38935	993 aa	Known RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	CASP3	P42574	277 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	KIR2DL3	P43628	341 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	PREP	P48147	710 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	PIP4K2A	P48426	406 aa	Predicted RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	PTDSS1	P48651	473 aa	Known RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	SLC11A2	P49281	568 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	SULT1E1	P49888	294 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	POLG	P54098	1239 aa	Predicted RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	VCP	P55072	806 aa	Known RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	CLRN1	P58418	232 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	NLRP5	P59047	1200 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	YPEL5	P62699	121 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	OLR1	P78380	273 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	BLOC1S1	P78537	153 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	TXNL4A	P83876	142 aa	Known RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	ACSM2A	Q08AH3	577 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	SF3A3	Q12874	501 aa	Known RBP eCLIP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	PTP4A2	Q12974	167 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	CSTF3	Q12996	717 aa	Known RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	CBX3	Q13185	183 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	SEMA3B	Q13214	749 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	MTM1	Q13496	603 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	OLIG2	Q13516	323 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	SNW1	Q13573	536 aa	Known RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	ALCAM	Q13740	583 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	SNTB1	Q13884	538 aa	Known RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	MYBPC3	Q14896	1274 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	NAA25	Q14CX7	972 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	RBBP5	Q15291	538 aa	Known RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	SHB	Q15464	509 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	OASL	Q15646	514 aa	Known RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	NAB2	Q15742	525 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	TBR1	Q16650	682 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	ALG11	Q2TAA5	492 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	P3H1	Q32P28	736 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	EDRF1	Q3B7T1	1238 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	SETMAR	Q53H47	684 aa	Predicted RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	KLHL26	Q53HC5	615 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	FBLN7	Q53RD9	439 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	DCAF6	Q58WW2	860 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	MDH1B	Q5I0G3	518 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	RAB41	Q5JT25	222 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	PLAC9	Q5JTB6	97 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	SLC10A5	Q5PT55	438 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	ZBTB41	Q5SVQ8	909 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	ERMARD	Q5T6L9	678 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	KLHDC7A	Q5VTJ3	777 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	KIAA1614	Q5VZ46	1190 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	ACSM2B	Q68CK6	577 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	RNF43	Q68DV7	783 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	TMEM200B	Q69YZ2	307 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	FSTL4	Q6MZW2	842 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	JMJD6	Q6NYC1	403 aa	Predicted RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	TATDN1	Q6P1N9	297 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	KLHL35	Q6PF15	583 aa		1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	PSRC1	Q6PGN9	363 aa	Predicted RBP	1.71	□□□□□ -2.14
MECP2-222	ENST00000637533	DRICH1	Q6PGQ1	229 aa	Predicted RBP	1.71	□□□□□ -2.14

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