RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 SEPT5Q99719 369 aaPredicted RBP22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 WDR83Q9BRX9 315 aaKnown RBP22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 TSPYL1Q9H0U9 437 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 RAB6BQ9NRW1 208 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 RCOR3Q9P2K3 495 aaPredicted RBP22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 CTNNAL1Q9UBT7 734 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 XPO7Q9UIA9 1087 aaKnown RBP22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 MTMR11A4FU01 709 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 CLTBP09497 229 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 RPL17P18621 184 aaKnown RBP22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 MAGOHP61326 146 aaKnown RBP22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 HOOK3Q86VS8 718 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 CDKL3Q8IVW4 592 aaPredicted RBP22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 FUBP3Q96I24 572 aaKnown RBP eCLIP22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 CEP41Q9BYV8 373 aa22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 PRDM5Q9NQX1 630 aaPredicted RBP22.4■■□□□ 1.18
CHRNA7-228ENST00000637519 COL4A6Q14031 1691 aa22.39■■□□□ 1.18
CHRNA7-228ENST00000637519 DCLK1O15075 740 aa22.39■■□□□ 1.17
CHRNA7-228ENST00000637519 IGLV3-25P01717 112 aa22.39■■□□□ 1.17
CHRNA7-228ENST00000637519 TPI1P60174 286 aa22.39■■□□□ 1.17
CHRNA7-228ENST00000637519 IKBKEQ14164 716 aa22.39■■□□□ 1.17
CHRNA7-228ENST00000637519 HIF1AQ16665 826 aa22.39■■□□□ 1.17
CHRNA7-228ENST00000637519 NUP93Q8N1F7 819 aa22.39■■□□□ 1.17
CHRNA7-228ENST00000637519 RTP4Q96DX8 246 aa22.39■■□□□ 1.17
CHRNA7-228ENST00000637519 TMEM175Q9BSA9 504 aa22.39■■□□□ 1.17
CHRNA7-228ENST00000637519 VN1R3Q9BXE9 311 aa22.39■■□□□ 1.17
CHRNA7-228ENST00000637519 RRN3Q9NYV6 651 aa22.39■■□□□ 1.17
CHRNA7-228ENST00000637519 OR6C75A6NL08 312 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 IRAK2O43187 625 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 DGKIO75912 1065 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 ERCC2P18074 760 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 NR2C2P49116 596 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 IFI35P80217 286 aaPredicted RBP22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 DEFB103AP81534 67 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 MGAT5BQ3V5L5 792 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 CNKSR3Q6P9H4 555 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 VSTM1Q6UX27 236 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 PCGF5Q86SE9 256 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 NPWQ8N729 165 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 TTPALQ9BTX7 342 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 ABCC13Q9NSE7 274 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 GMIPQ9P107 970 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 FOXO6A8MYZ6 492 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 C2CD2LO14523 706 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 RASGRF2O14827 1237 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 TRIM66O15016 1216 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 F9P00740 461 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 ARL13BQ3SXY8 428 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 AGBL2Q5U5Z8 902 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 C1orf53Q5VUE5 145 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 RELL1Q8IUW5 271 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 C8orf48Q96LL4 319 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 CWH43Q9H720 699 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 CDY1Q9Y6F8 540 aa22.38■■□□□ 1.17
CHRNA7-228ENST00000637519 METTL18O95568 372 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 CSF2RAP15509 400 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 ACTN2P35609 894 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 ALDH7A1P49419 539 aaKnown RBP22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 KCNJ11Q14654 390 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 CENPUQ71F23 418 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 TFB1MQ8WVM0 346 aaKnown RBP22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 SIK2Q9H0K1 926 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 PAK5Q9P286 719 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 OR12D3Q9UGF7 316 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 CFAP69A5D8W1 941 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 TBC1D4O60343 1298 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 LRIG2O94898 1065 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 PARNO95453 639 aaKnown RBP22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 GJA8P48165 433 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 AP1B1Q10567 949 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 DUSP4Q13115 394 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 EIF4EBP2Q13542 120 aaPredicted RBP22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 AUHQ13825 339 aaKnown RBP22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 CCDC38Q502W7 563 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 HEATR6Q6AI08 1181 aaKnown RBP22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 FBXO46Q6PJ61 603 aaPredicted RBP22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 FOXP3Q9BZS1 431 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 SMOC2Q9H3U7 446 aa22.37■■□□□ 1.17
CHRNA7-228ENST00000637519 TRIM43BA6NCK2 446 aa22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 RGS16O15492 202 aaPredicted RBP22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 AVILO75366 819 aa22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 MOCS2O96007 188 aaPredicted RBP22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 CAPN2P17655 700 aa22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 AIF1P55008 147 aa22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 XRCC4Q13426 336 aa22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 KDM7AQ6ZMT4 941 aa22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 DEPDC1BQ8WUY9 529 aa22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 TRIM43Q96BQ3 446 aaPredicted RBP22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 TLCD1Q96CP7 247 aa22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 C11orf49Q9H6J7 331 aa22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 ETNK1Q9HBU6 452 aa22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 SEPT10Q9P0V9 454 aa22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 SCML2Q9UQR0 700 aa22.36■■□□□ 1.17
CHRNA7-228ENST00000637519 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 SRGAP2BP0DMP2 458 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 ACRP10323 421 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 MAGEA11P43364 429 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 ARL4CP56559 192 aa22.35■■□□□ 1.17
CHRNA7-228ENST00000637519 GUCY1A3Q02108 690 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms