RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 NRLP54845 237 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 ARL13BQ3SXY8 428 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 ZC3H12AQ5D1E8 599 aaKnown RBP8.54□□□□□ -1.04
PNKP-226ENST00000636840 BRMS1LQ5PSV4 323 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 RABGAP1LQ5R372 815 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 MPP7Q5T2T1 576 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 CWF19L1Q69YN2 538 aaKnown RBP8.54□□□□□ -1.04
PNKP-226ENST00000636840 GRAMD4Q6IC98 578 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 SDE2Q6IQ49 451 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 DNAJC24Q6P3W2 148 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 TXNDC11Q6PKC3 985 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 LRRC31Q6UY01 552 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 MAMSTRQ6ZN01 415 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 ZNF571Q7Z3V5 609 aaPredicted RBP8.54□□□□□ -1.04
PNKP-226ENST00000636840 TRMT11Q7Z4G4 463 aaKnown RBP8.54□□□□□ -1.04
PNKP-226ENST00000636840 TAC4Q86UU9 113 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 C1orf210Q8IVY1 113 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 VSTM4Q8IW00 320 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 CCDC105Q8IYK2 499 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 MCOLN2Q8IZK6 566 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 SPEM1Q8N4L4 309 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 NAT16Q8N8M0 369 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 TMEM105Q8N8V8 129 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 ADAM32Q8TC27 787 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 UCMAQ8WVF2 138 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 WBP2Q969T9 261 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 CHFRQ96EP1 664 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 PGAP3Q96FM1 320 aaPredicted RBP8.54□□□□□ -1.04
PNKP-226ENST00000636840 SLC39A13Q96H72 371 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 PCDHB18PQ96TA0 734 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 NCAPGQ9BPX3 1015 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 RBSNQ9H1K0 784 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 MRPL47Q9HD33 250 aaKnown RBP8.54□□□□□ -1.04
PNKP-226ENST00000636840 DNAJC17Q9NVM6 304 aaKnown RBP8.54□□□□□ -1.04
PNKP-226ENST00000636840 ADAMTS1Q9UHI8 967 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 STOML2Q9UJZ1 356 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 MTF2Q9Y483 593 aaPredicted RBP8.54□□□□□ -1.04
PNKP-226ENST00000636840 SCINQ9Y6U3 715 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 PATJQ8NI35 1801 aa8.54□□□□□ -1.04
PNKP-226ENST00000636840 A0A0A0MRY4 1105 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 OTOL1A6NHN0 477 aaPredicted RBP8.53□□□□□ -1.04
PNKP-226ENST00000636840 F5H5T6 163 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 TIMM44O43615 452 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 TSPAN3O60637 253 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 TULP3O75386 442 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 KAT7O95251 611 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 IGLV3-27P01718 113 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 GYPCP04921 128 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 COL9A1P20849 921 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 OPRD1P41143 372 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 SLC6A11P48066 632 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 PTPN5P54829 565 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 VCPP55072 806 aaKnown RBP8.53□□□□□ -1.04
PNKP-226ENST00000636840 OXCT1P55809 520 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 GSCP56915 257 aaPredicted RBP8.53□□□□□ -1.04
PNKP-226ENST00000636840 MRPS21P82921 87 aaKnown RBP8.53□□□□□ -1.04
PNKP-226ENST00000636840 HSF5Q4G112 596 aaPredicted RBP8.53□□□□□ -1.04
PNKP-226ENST00000636840 C2CD6Q53TS8 623 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 CCDC122Q5T0U0 273 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 PIK3R6Q5UE93 754 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 TMC6Q7Z403 805 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 PHLDB2Q86SQ0 1253 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 HJURPQ8NCD3 748 aaPredicted RBP8.53□□□□□ -1.04
PNKP-226ENST00000636840 C3orf20Q8ND61 904 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 KCNV2Q8TDN2 545 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 RXFP2Q8WXD0 754 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 ACDQ96AP0 544 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 FCRL2Q96LA5 508 aaPredicted RBP8.53□□□□□ -1.04
PNKP-226ENST00000636840 CCDC42Q96M95 316 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 NPY6RQ99463 290 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 CHRDQ9H2X0 955 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 METTL5Q9NRN9 209 aaKnown RBP8.53□□□□□ -1.04
PNKP-226ENST00000636840 PLK2Q9NYY3 685 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 TMEM59LQ9UK28 342 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 FBXO4Q9UKT5 387 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 SLC8A2Q9UPR5 921 aa8.53□□□□□ -1.04
PNKP-226ENST00000636840 ARIH1Q9Y4X5 557 aaPredicted RBP8.53□□□□□ -1.04
PNKP-226ENST00000636840 H0Y626 953 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 DDX3XO00571 662 aaKnown RBP eCLIP8.52□□□□□ -1.05
PNKP-226ENST00000636840 NPC1O15118 1278 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 AKR1B10O60218 316 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 CACNG3O60359 315 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 TBL1XO60907 577 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 RNF8O76064 485 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 MOCS3O95396 460 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 EGFP01133 1207 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 PENKP01210 267 aaPredicted RBP8.52□□□□□ -1.05
PNKP-226ENST00000636840 IGLV3-25P01717 112 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 GPD1P21695 349 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 HNRNPH3P31942 346 aaKnown RBP8.52□□□□□ -1.05
PNKP-226ENST00000636840 RDXP35241 583 aaKnown RBP8.52□□□□□ -1.05
PNKP-226ENST00000636840 PTPN9P43378 593 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 CXCR3P49682 368 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 ZNF75DP51815 510 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 ATP11AP98196 1134 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 CSTF1Q05048 431 aaKnown RBP8.52□□□□□ -1.05
PNKP-226ENST00000636840 PTP4A2Q12974 167 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 CCINQ13939 588 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 ANGPT1Q15389 498 aa8.52□□□□□ -1.05
PNKP-226ENST00000636840 TTC39BQ5VTQ0 682 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms