RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 A0A087WZ62 844 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ERVV-2B6SEH9 535 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 AIM2O14862 343 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 OR10H2O60403 315 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 XYLBO75191 536 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 IL1AP01583 271 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 CXCR2P25025 360 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 AVPR1AP37288 418 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ALDH9A1P49189 494 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 EIF2B2P49770 351 aaKnown RBP6.15□□□□□ -1.42
SCN1A-212ENST00000636194 FAM83BQ5T0W9 1011 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 CCDC137Q6PK04 289 aaKnown RBP6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-212ENST00000636194 UTP15Q8TED0 518 aaKnown RBP6.15□□□□□ -1.42
SCN1A-212ENST00000636194 TMEM159Q96B96 161 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 PRICKLE1Q96MT3 831 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF285Q96NJ3 590 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 PIGSQ96S52 555 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 TBC1D10AQ9BXI6 508 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 RHBDL2Q9NX52 303 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 GNG13Q9P2W3 67 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 MEMO1Q9Y316 297 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 FAM187AA6NFU0 413 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 GNB5O14775 395 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 INPP4BO15327 924 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 CDH16O75309 829 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 PDE5AO76074 875 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 SEC31AO94979 1220 aaKnown RBP6.15□□□□□ -1.42
SCN1A-212ENST00000636194 PRKAR1AP10644 381 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 PPM1AP35813 382 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 CAPGP40121 348 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 CPA2P48052 419 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 DGUOKQ16854 277 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ARSHQ5FYA8 562 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ANKRD26P1Q6NSI1 321 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 HCAR2Q8TDS4 363 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 RORBQ92753 470 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 KLHL4Q9C0H6 718 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ZFYVE28Q9HCC9 887 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 NKIRAS2Q9NYR9 191 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 USP15Q9Y4E8 981 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-212ENST00000636194 NOX1Q9Y5S8 564 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 GTPBP1O00178 669 aaKnown RBP6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF806P0C7X5 589 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 CSH1P0DML2 217 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 CSH2P0DML3 217 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 PUS10Q3MIT2 529 aaKnown RBP6.15□□□□□ -1.42
SCN1A-212ENST00000636194 NOTUMQ6P988 496 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 AFTPHQ6ULP2 937 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ARHGEF19Q8IW93 802 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 THNSL1Q8IYQ7 743 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 SLC35F6Q8N357 371 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 LPCAT1Q8NF37 534 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 COX4I2Q96KJ9 171 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 MYL10Q9BUA6 226 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ZBTB40Q9NUA8 1239 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 FANCLQ9NW38 375 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ADPRHL2Q9NX46 363 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 STOX2Q9P2F5 926 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-212ENST00000636194 GGT7Q9UJ14 662 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 DUOX2Q9NRD8 1548 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 RIMS2Q9UQ26 1411 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 CEP250Q9BV73 2442 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 SUPT7LO94864 414 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 FTLP02792 175 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-212ENST00000636194 ITGALP20701 1170 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 TCF7P36402 384 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-212ENST00000636194 MAGEA6P43360 314 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 STK4Q13043 487 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 AARDQ4LEZ3 155 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 PAGE2Q7Z2X7 111 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 PMM1Q92871 262 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 HIC2Q96JB3 615 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 COLEC11Q9BWP8 271 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 GSDMCQ9BYG8 508 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 BRINP2Q9C0B6 783 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 IL1RL2Q9HB29 575 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 FAM217BQ9NTX9 383 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-212ENST00000636194 UPB1Q9UBR1 384 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF222Q9UK12 451 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 UGGT2Q9NYU1 1516 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 ITIH6Q6UXX5 1313 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF644Q9H582 1327 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-212ENST00000636194 RNMTO43148 476 aaKnown RBP6.15□□□□□ -1.43
SCN1A-212ENST00000636194 URODP06132 367 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 ATP6V1B2P21281 511 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 MUTP22033 750 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 GSTM5P46439 218 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 PRELPP51888 382 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 C21orf59P57076 290 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 FAM189A2Q15884 450 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 PRR5LQ6MZQ0 368 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 PPP1R18Q6NYC8 613 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 TMEM26Q6ZUK4 368 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF579Q8NAF0 562 aaKnown RBP6.15□□□□□ -1.43
SCN1A-212ENST00000636194 TMIEQ8NEW7 156 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 GPRASP2Q96D09 838 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 PNMA5Q96PV4 448 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 NAT9Q9BTE0 207 aa6.15□□□□□ -1.43
SCN1A-212ENST00000636194 MCCC2Q9HCC0 563 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms