RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 NTAN1Q96AB6 310 aa12.8□□□□□ -0.36
PTPN11-205ENST00000635625 MRRFQ96E11 262 aaKnown RBP12.8□□□□□ -0.36
PTPN11-205ENST00000635625 CFAP36Q96G28 342 aa12.8□□□□□ -0.36
PTPN11-205ENST00000635625 SLC2A13Q96QE2 648 aa12.8□□□□□ -0.36
PTPN11-205ENST00000635625 B3GNT5Q9BYG0 378 aa12.8□□□□□ -0.36
PTPN11-205ENST00000635625 BRD8Q9H0E9 1235 aa12.8□□□□□ -0.36
PTPN11-205ENST00000635625 RAB6CQ9H0N0 254 aa12.8□□□□□ -0.36
PTPN11-205ENST00000635625 CDHR5Q9HBB8 845 aa12.8□□□□□ -0.36
PTPN11-205ENST00000635625 HES2Q9Y543 173 aa12.8□□□□□ -0.36
PTPN11-205ENST00000635625 PCDHA11Q9Y5I1 949 aa12.8□□□□□ -0.36
PTPN11-205ENST00000635625 TSC2P49815 1807 aa12.8□□□□□ -0.36
PTPN11-205ENST00000635625 TMEM88BA6NKF7 163 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 M0QZ92 97 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 IGF2BP3O00425 579 aaKnown RBP eCLIP12.79□□□□□ -0.36
PTPN11-205ENST00000635625 TRAFD1O14545 582 aaPredicted RBP12.79□□□□□ -0.36
PTPN11-205ENST00000635625 GABRDO14764 452 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 SPTLC1O15269 473 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 NCAM2O15394 837 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 AKAP5P24588 427 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 RGS2P41220 211 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 LHX1P48742 406 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 GBE1Q04446 702 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 FAAP100Q0VG06 881 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 PRKD1Q15139 912 aaPredicted RBP12.79□□□□□ -0.36
PTPN11-205ENST00000635625 TIFABQ6ZNK6 161 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 PIGZQ86VD9 579 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 SIX6OS1Q8N1H7 587 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 ZNF276Q8N554 614 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 CCDC110Q8TBZ0 833 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 ACMSDQ8TDX5 336 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 NPY6RQ99463 290 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 APOL6Q9BWW8 343 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 TSSK1BQ9BXA7 367 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 MYLK2Q9H1R3 596 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 LRRC4Q9HBW1 653 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 NOD2Q9HC29 1040 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 CHST12Q9NRB3 414 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 DTLQ9NZJ0 730 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 MTO1Q9Y2Z2 717 aaKnown RBP12.79□□□□□ -0.36
PTPN11-205ENST00000635625 TRPM7Q96QT4 1865 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 C9IYK1 514 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 DNAJC6O75061 913 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 ALDH1A2O94788 518 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 PDGFRBP09619 1106 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 FAM200BP0CF97 657 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 PTPN1P18031 435 aaKnown RBP12.79□□□□□ -0.36
PTPN11-205ENST00000635625 HCAR3P49019 387 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 GTF2A1P52655 376 aaPredicted RBP12.79□□□□□ -0.36
PTPN11-205ENST00000635625 GJA9P57773 515 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 SCAPQ12770 1279 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 PAFAH1B3Q15102 231 aaKnown RBP12.79□□□□□ -0.36
PTPN11-205ENST00000635625 PREPLQ4J6C6 727 aaPredicted RBP12.79□□□□□ -0.36
PTPN11-205ENST00000635625 INTS6LQ5JSJ4 861 aaKnown RBP12.79□□□□□ -0.36
PTPN11-205ENST00000635625 WLSQ5T9L3 541 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 ATG16L1Q676U5 607 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 RSPH3Q86UC2 560 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 CTAGE3PQ8IX95 158 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 DEFB106AQ8N104 65 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 TAB3Q8N5C8 712 aaPredicted RBP12.79□□□□□ -0.36
PTPN11-205ENST00000635625 CCDC185Q8N715 623 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 PPM1NQ8N819 430 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 SMG8Q8ND04 991 aaKnown RBP12.79□□□□□ -0.36
PTPN11-205ENST00000635625 CDKL2Q92772 493 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 ERP27Q96DN0 273 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 SIGLEC10Q96LC7 697 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 PPP1R10Q96QC0 940 aaKnown RBP12.79□□□□□ -0.36
PTPN11-205ENST00000635625 TRIM62Q9BVG3 475 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 CXCL16Q9H2A7 254 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 SLCO1B3Q9NPD5 702 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 ARHGEF4Q9NR80 690 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 LNPEPQ9UIQ6 1025 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 CHKBQ9Y259 395 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 PTCH2Q9Y6C5 1203 aa12.79□□□□□ -0.36
PTPN11-205ENST00000635625 TRIM49D1C9J1S8 452 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 I3L4J1 428 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 BIRC5O15392 142 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 MTSS1O43312 755 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 MYL3P08590 195 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 CCND1P24385 295 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 LMO2P25791 158 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 SERPINB4P48594 390 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 ADIGQ0VDE8 80 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 FRG1Q14331 258 aaKnown RBP12.78□□□□□ -0.36
PTPN11-205ENST00000635625 FAM91A1Q658Y4 838 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 TWF2Q6IBS0 349 aaKnown RBP12.78□□□□□ -0.36
PTPN11-205ENST00000635625 LRRC8BQ6P9F7 803 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 UNC5AQ6ZN44 842 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 ZNF534Q76KX8 674 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 MARK2Q7KZI7 788 aaKnown RBP12.78□□□□□ -0.36
PTPN11-205ENST00000635625 NLRP9Q7RTR0 991 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 CFAP61Q8NHU2 1237 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 CLEC4CQ8WTT0 213 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 RNF139Q8WU17 664 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 TMEM40Q8WWA1 233 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 WNT8BQ93098 351 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 TTC17Q96AE7 1141 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 STAMBPL1Q96FJ0 436 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 PGAP3Q96FM1 320 aaPredicted RBP12.78□□□□□ -0.36
PTPN11-205ENST00000635625 SERAC1Q96JX3 654 aa12.78□□□□□ -0.36
PTPN11-205ENST00000635625 APBA2Q99767 749 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms