RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 LRRC4Q9HBW1 653 aa14.12□□□□□ -0.15
TCF4-262ENST00000628078 USP36Q9P275 1121 aaKnown RBP14.12□□□□□ -0.15
TCF4-262ENST00000628078 TSPAN16Q9UKR8 245 aa14.12□□□□□ -0.15
TCF4-262ENST00000628078 NUMA1Q14980 2115 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 A0A1B0GTW7 788 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 GOLGA6L7A0A1B0GV03 622 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 YJEFN3A6XGL0 299 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 METTL12A8MUP2 240 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 E7ENQ6 273 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 CSNK1EP49674 416 aaKnown RBP14.11□□□□□ -0.15
TCF4-262ENST00000628078 RGS7P49802 495 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 SGSHP51688 502 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 BNC1Q01954 994 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 RING1Q06587 406 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 ADIGQ0VDE8 80 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 ZCWPW2Q504Y3 356 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 FNDC3BQ53EP0 1204 aaKnown RBP14.11□□□□□ -0.15
TCF4-262ENST00000628078 ARHGAP17Q68EM7 881 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 ISM2Q6H9L7 571 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 C19orf48Q6RUI8 117 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 CHST9Q7L1S5 443 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 BHLHA9Q7RTU4 235 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 SLCO6A1Q86UG4 719 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 ARHGAP18Q8N392 663 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 ZNF276Q8N554 614 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 RNF139Q8WU17 664 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 CDK5RAP1Q96SZ6 601 aaKnown RBP14.11□□□□□ -0.15
TCF4-262ENST00000628078 GAREM1Q9H706 876 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 SUSD2Q9UGT4 822 aa14.11□□□□□ -0.15
TCF4-262ENST00000628078 CACNA1GO43497 2377 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 A0A1B0GVT2 93 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 TMEM8BA6NDV4 472 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 CETN3O15182 167 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 BCAT2O15382 392 aaPredicted RBP14.1□□□□□ -0.15
TCF4-262ENST00000628078 FTH1P19P0C7X4 201 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 EPB41P11171 864 aaKnown RBP14.1□□□□□ -0.15
TCF4-262ENST00000628078 HOXD9P28356 352 aaPredicted RBP14.1□□□□□ -0.15
TCF4-262ENST00000628078 HLA-FP30511 346 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 GTF2H1P32780 548 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 ACSL1P33121 698 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 PRCPP42785 496 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 PMS1P54277 932 aaKnown RBP14.1□□□□□ -0.15
TCF4-262ENST00000628078 SLC8A3P57103 927 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 ENPP2Q13822 863 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 COL9A2Q14055 689 aaPredicted RBP14.1□□□□□ -0.15
TCF4-262ENST00000628078 TRIP4Q15650 581 aaPredicted RBP14.1□□□□□ -0.15
TCF4-262ENST00000628078 MPPE1Q53F39 396 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 CCDC157Q569K6 752 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 BSPRYQ5W0U4 402 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 ANKRD40Q6AI12 368 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 PM20D1Q6GTS8 502 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 RFWD3Q6PCD5 774 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 LAYNQ6UX15 382 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 RAB44Q7Z6P3 723 aaPredicted RBP14.1□□□□□ -0.15
TCF4-262ENST00000628078 CPXM2Q8N436 756 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 RBBP8NLQ8NC74 664 aaPredicted RBP14.1□□□□□ -0.15
TCF4-262ENST00000628078 DNASE2BQ8WZ79 361 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 TMA16Q96EY4 203 aaKnown RBP14.1□□□□□ -0.15
TCF4-262ENST00000628078 IPO9Q96P70 1041 aaKnown RBP14.1□□□□□ -0.15
TCF4-262ENST00000628078 NUP58Q9BVL2 599 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 UBXN6Q9BZV1 441 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 C6orf106Q9H6K1 298 aaPredicted RBP14.1□□□□□ -0.15
TCF4-262ENST00000628078 ABCB8Q9NUT2 735 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 STIM2Q9P246 746 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 LHX6Q9UPM6 363 aa14.1□□□□□ -0.15
TCF4-262ENST00000628078 FNDC3AQ9Y2H6 1198 aaKnown RBP14.1□□□□□ -0.15
TCF4-262ENST00000628078 PLXNB3Q9ULL4 1909 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 FAM237AA0A1B0GTK4 181 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 TRIM49BA6NDI0 452 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 GABBR2O75899 941 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 OXTRP30559 389 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 HARS2P49590 506 aaKnown RBP14.09□□□□□ -0.15
TCF4-262ENST00000628078 NUMBP49757 651 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 SCAPQ12770 1279 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 CUL2Q13617 745 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 ZNF423Q2M1K9 1284 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 HLA-BQ31612 363 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 SGO2Q562F6 1265 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 METTL3Q86U44 580 aaKnown RBP14.09□□□□□ -0.15
TCF4-262ENST00000628078 ZC3H3Q8IXZ2 948 aaKnown RBP14.09□□□□□ -0.15
TCF4-262ENST00000628078 WFDC5Q8TCV5 224 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 PLD4Q96BZ4 506 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 HESX1Q9UBX0 185 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 TMEM131Q92545 1883 aa14.09□□□□□ -0.15
TCF4-262ENST00000628078 CKAP5Q14008 2032 aa14.08□□□□□ -0.15
TCF4-262ENST00000628078 H0Y626 953 aa14.08□□□□□ -0.16
TCF4-262ENST00000628078 XPO1O14980 1071 aaKnown RBP14.08□□□□□ -0.16
TCF4-262ENST00000628078 STX10O60499 249 aa14.08□□□□□ -0.16
TCF4-262ENST00000628078 TBL1XO60907 577 aa14.08□□□□□ -0.16
TCF4-262ENST00000628078 TRIM16O95361 564 aa14.08□□□□□ -0.16
TCF4-262ENST00000628078 CD70P32970 193 aa14.08□□□□□ -0.16
TCF4-262ENST00000628078 MATKP42679 507 aa14.08□□□□□ -0.16
TCF4-262ENST00000628078 SLC14A1Q13336 389 aa14.08□□□□□ -0.16
TCF4-262ENST00000628078 EDRF1Q3B7T1 1238 aa14.08□□□□□ -0.16
TCF4-262ENST00000628078 LRSAM1Q6UWE0 723 aa14.08□□□□□ -0.16
TCF4-262ENST00000628078 SIX6OS1Q8N1H7 587 aa14.08□□□□□ -0.16
TCF4-262ENST00000628078 CADM4Q8NFZ8 388 aa14.08□□□□□ -0.16
TCF4-262ENST00000628078 OR2T3Q8NH03 318 aa14.08□□□□□ -0.16
TCF4-262ENST00000628078 RHBDD1Q8TEB9 315 aa14.08□□□□□ -0.16
TCF4-262ENST00000628078 CLEC4CQ8WTT0 213 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms