RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PRMT8Q9NR22 394 aaPredicted RBP15.32■□□□□ 0.04
PNKP-221ENST00000627317 DDIT4Q9NX09 232 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 TMEM59LQ9UK28 342 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 NENFQ9UMX5 172 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 NDRG2Q9UN36 371 aaKnown RBP15.32■□□□□ 0.04
PNKP-221ENST00000627317 ZNF292O60281 2723 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 SYNJ2BP-COX16A0A087WUM0 186 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 E2F8A0AVK6 867 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 SCAMP3O14828 347 aaKnown RBP15.31■□□□□ 0.04
PNKP-221ENST00000627317 IRAK2O43187 625 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 STC2O76061 302 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 SP9P0CG40 484 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 TDGF1P13385 188 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 ARSAP15289 507 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 PDGFRAP16234 1089 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 DESP17661 470 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 SDC4P31431 198 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 IFNAR2P48551 515 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 GALCP54803 685 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 TBX4P57082 545 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 PITX1P78337 314 aaPredicted RBP15.31■□□□□ 0.04
PNKP-221ENST00000627317 MTAPQ13126 283 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 GAS6Q14393 721 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 SPA17Q15506 151 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 ITPRIPL2Q3MIP1 535 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 PLEKHA7Q6IQ23 1121 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 JOSD2Q8TAC2 188 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 TTC8Q8TAM2 541 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 RXFP2Q8WXD0 754 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 NELL1Q92832 810 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 DCLK3Q9C098 648 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 THAP2Q9H0W7 228 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 MRPL47Q9HD33 250 aaKnown RBP15.31■□□□□ 0.04
PNKP-221ENST00000627317 LUC7LQ9NQ29 371 aaKnown RBP15.31■□□□□ 0.04
PNKP-221ENST00000627317 COX16Q9P0S2 106 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 MIA3Q5JRA6 1907 aa15.31■□□□□ 0.04
PNKP-221ENST00000627317 CFAP54Q96N23 3096 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 TCRBV5S1A1TA0A578 114 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 C2CD4BA6NLJ0 364 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 M0QYT0 321 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 SLC9A3R1O14745 358 aaPredicted RBP15.3■□□□□ 0.04
PNKP-221ENST00000627317 NRDCO43847 1150 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 PTMAP06454 111 aaKnown RBP15.3■□□□□ 0.04
PNKP-221ENST00000627317 GPD1P21695 349 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 CORO1AP31146 461 aaKnown RBP15.3■□□□□ 0.04
PNKP-221ENST00000627317 RFC1P35251 1148 aaPredicted RBP15.3■□□□□ 0.04
PNKP-221ENST00000627317 HARS2P49590 506 aaKnown RBP15.3■□□□□ 0.04
PNKP-221ENST00000627317 NME3Q13232 169 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 MAMLD1Q13495 774 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 RUNX3Q13761 415 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 CCINQ13939 588 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 PDGFRLQ15198 375 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 EML3Q32P44 896 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 SLC25A52Q3SY17 297 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 PPP1R15BQ5SWA1 713 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 C10orf76Q5T2E6 689 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 NUGGCQ68CJ6 796 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 KIAA1958Q8N8K9 716 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 CCDC112Q8NEF3 446 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 OSCP1Q8WVF1 389 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 RNF34Q969K3 372 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 CFAP57Q96MR6 1250 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 TBCBQ99426 244 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 NPY6RQ99463 290 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 IER2Q9BTL4 223 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 PACSIN1Q9BY11 444 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 EBF3Q9H4W6 596 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 DUS2Q9NX74 493 aaKnown RBP15.3■□□□□ 0.04
PNKP-221ENST00000627317 FBXO4Q9UKT5 387 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 TLR6Q9Y2C9 796 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 WNT6Q9Y6F9 365 aa15.3■□□□□ 0.04
PNKP-221ENST00000627317 EPN1Q9Y6I3 576 aaPredicted RBP15.3■□□□□ 0.04
PNKP-221ENST00000627317 EIF3CLB5ME19 914 aaKnown RBP15.29■□□□□ 0.04
PNKP-221ENST00000627317 NCAM2O15394 837 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 NDUFA10O95299 355 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 IGLV3-25P01717 112 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 APOEP02649 317 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 CYP1A2P05177 515 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 TMEM253P0C7T8 217 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 PTPN9P43378 593 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 RPL7AP62424 266 aaKnown RBP15.29■□□□□ 0.04
PNKP-221ENST00000627317 ATP11AP98196 1134 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 DEUP1Q05D60 604 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 RING1Q06587 406 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 CDO1Q16878 200 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 ZNF528Q3MIS6 628 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 TRNP1Q6NT89 227 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 RAD9BQ6WBX8 426 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 SND1Q7KZF4 910 aaKnown RBP eCLIP15.29■□□□□ 0.04
PNKP-221ENST00000627317 TMEM139Q8IV31 216 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 UNC45BQ8IWX7 931 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 WBP2Q969T9 261 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 ARHGEF26Q96DR7 871 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 EIF3CQ99613 913 aaKnown RBP15.29■□□□□ 0.04
PNKP-221ENST00000627317 NUP85Q9BW27 656 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 TMEM51Q9NW97 253 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 SPATA6Q9NWH7 488 aaPredicted RBP15.29■□□□□ 0.04
PNKP-221ENST00000627317 TBC1D14Q9P2M4 693 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 ZNF510Q9Y2H8 683 aa15.29■□□□□ 0.04
PNKP-221ENST00000627317 PAXBP1Q9Y5B6 917 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms