RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 SCNN1AP37088 669 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 KIR2DL1P43626 348 aaPredicted RBP17.41■□□□□ 0.38
UBE3D-208ENST00000626828 NOMO3P69849 1222 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 FMO1Q01740 532 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 ARID5AQ03989 594 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 EMC10Q5UCC4 262 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 TAC4Q86UU9 113 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 ADAM32Q8TC27 787 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 SLC20A1Q8WUM9 679 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 BHMTQ93088 406 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 PIWIL1Q96J94 861 aaKnown RBP17.41■□□□□ 0.38
UBE3D-208ENST00000626828 FCRL2Q96LA5 508 aaPredicted RBP17.41■□□□□ 0.38
UBE3D-208ENST00000626828 EDEM3Q9BZQ6 932 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 SLC27A6Q9Y2P4 619 aa17.41■□□□□ 0.38
UBE3D-208ENST00000626828 CCDC163A0A0D9SF12 145 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 GFRA2O00451 464 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 TRIM24O15164 1050 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 TSPAN3O60637 253 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 LILRB5O75023 590 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 IGLV3-25P01717 112 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 APOEP02649 317 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 TIE1P35590 1138 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 MATKP42679 507 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 MRE11P49959 708 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 UBASH3AP57075 661 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 EIF4EBP2Q13542 120 aaPredicted RBP17.4■□□□□ 0.38
UBE3D-208ENST00000626828 DMC1Q14565 340 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 NFKBIBQ15653 356 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 C10orf76Q5T2E6 689 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 MPP7Q5T2T1 576 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 NAA35Q5VZE5 725 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 ALYREFQ86V81 257 aaKnown RBP17.4■□□□□ 0.38
UBE3D-208ENST00000626828 LONP2Q86WA8 852 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.4■□□□□ 0.38
UBE3D-208ENST00000626828 MMP17Q9ULZ9 603 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 SDK1Q7Z5N4 2213 aa17.4■□□□□ 0.38
UBE3D-208ENST00000626828 EP300Q09472 2414 aaPredicted RBP17.39■□□□□ 0.37
UBE3D-208ENST00000626828 DAB1O75553 588 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 CNR2P34972 360 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 FNTBP49356 437 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 RNASE9P60153 205 aaKnown RBP17.39■□□□□ 0.37
UBE3D-208ENST00000626828 MTA1Q13330 715 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 E2F5Q15329 346 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 ZC3H12AQ5D1E8 599 aaKnown RBP17.39■□□□□ 0.37
UBE3D-208ENST00000626828 EOGTQ5NDL2 527 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 PIK3R6Q5UE93 754 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 TRMT11Q7Z4G4 463 aaKnown RBP17.39■□□□□ 0.37
UBE3D-208ENST00000626828 IRF2BP2Q7Z5L9 587 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 XYLT1Q86Y38 959 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 SFTPA1Q8IWL2 248 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 CCDC33Q8N5R6 958 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 ATP6V0D2Q8N8Y2 350 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 IL17RCQ8NAC3 791 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 RNF34Q969K3 372 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 BTN2A3PQ96KV6 586 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 AGPAT1Q99943 283 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 NUP58Q9BVL2 599 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 FAM204AQ9H8W3 233 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 DDIT4Q9NX09 232 aa17.39■□□□□ 0.37
UBE3D-208ENST00000626828 GOLGA6L7A0A1B0GV03 622 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 TIMM44O43615 452 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 KLF8O95600 359 aaPredicted RBP17.38■□□□□ 0.37
UBE3D-208ENST00000626828 F9P00740 461 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 LMNAP02545 664 aaKnown RBP17.38■□□□□ 0.37
UBE3D-208ENST00000626828 UNGP13051 313 aaPredicted RBP17.38■□□□□ 0.37
UBE3D-208ENST00000626828 ABCB4P21439 1286 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 MMP8P22894 467 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 CCR1P32246 355 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 FAM133BQ5BKY9 247 aaKnown RBP17.38■□□□□ 0.37
UBE3D-208ENST00000626828 FAM102AQ5T9C2 384 aaPredicted RBP17.38■□□□□ 0.37
UBE3D-208ENST00000626828 HEATR6Q6AI08 1181 aaKnown RBP17.38■□□□□ 0.37
UBE3D-208ENST00000626828 SDE2Q6IQ49 451 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 ARCQ7LC44 396 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 WDR5BQ86VZ2 330 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 ALLCQ8N6M5 410 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 ZNF513Q8N8E2 541 aaPredicted RBP17.38■□□□□ 0.37
UBE3D-208ENST00000626828 BAP1Q92560 729 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 P2RY11Q96G91 374 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 PCDHB18PQ96TA0 734 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 STAP1Q9ULZ2 295 aa17.38■□□□□ 0.37
UBE3D-208ENST00000626828 ANTXRLA6NF34 631 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 KCNU1A8MYU2 1149 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 PRRT4C9JH25 899 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 M0QYT0 321 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 APBB3O95704 486 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 TNFAIP3P21580 790 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 HOXD11P31277 338 aaPredicted RBP17.37■□□□□ 0.37
UBE3D-208ENST00000626828 NSFP46459 744 aaKnown RBP17.37■□□□□ 0.37
UBE3D-208ENST00000626828 DGKEP52429 567 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 PITX1P78337 314 aaPredicted RBP17.37■□□□□ 0.37
UBE3D-208ENST00000626828 CRY1Q16526 586 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 FIGNQ5HY92 759 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 NADSYN1Q6IA69 706 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 RFWD3Q6PCD5 774 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 LRSAM1Q6UWE0 723 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 ZNF557Q8N988 423 aaPredicted RBP17.37■□□□□ 0.37
UBE3D-208ENST00000626828 TXNDC5Q8NBS9 432 aaKnown RBP17.37■□□□□ 0.37
UBE3D-208ENST00000626828 SLC30A5Q8TAD4 765 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 UCMAQ8WVF2 138 aa17.37■□□□□ 0.37
UBE3D-208ENST00000626828 NT5C3BQ969T7 300 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms