RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 TSHZ1Q6ZSZ6 1077 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 TRIM69Q86WT6 500 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 ZNF669Q96BR6 464 aaPredicted RBP11.39□□□□□ -0.59
VPS8-227ENST00000625842 CAPS2Q9BXY5 557 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 RANBP17Q9H2T7 1088 aaKnown RBP11.39□□□□□ -0.59
VPS8-227ENST00000625842 RBM22Q9NW64 420 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS8-227ENST00000625842 CLIC5Q9NZA1 410 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 TMCC3Q9ULS5 477 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 PXDNLA1KZ92 1463 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 SSU72P8A0A1W2PR75 194 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 F5H423 210 aaPredicted RBP11.39□□□□□ -0.59
VPS8-227ENST00000625842 RAD51BO15315 384 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 COL6A1P12109 1028 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 MAD2L1Q13257 205 aaPredicted RBP11.39□□□□□ -0.59
VPS8-227ENST00000625842 CCDC85BQ15834 202 aaPredicted RBP11.39□□□□□ -0.59
VPS8-227ENST00000625842 C11orf88Q6PI97 169 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 PLEKHM3Q6ZWE6 761 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 TEX9Q8N6V9 391 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 SH3GL1Q99961 368 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 PHACTR1Q9C0D0 580 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 FAM105AQ9NUU6 356 aa11.39□□□□□ -0.59
VPS8-227ENST00000625842 ANKDD1BA6NHY2 528 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 PLA2G6O60733 806 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 ASLP04424 464 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 UAP1L1Q3KQV9 507 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 CCDC137Q6PK04 289 aaKnown RBP11.38□□□□□ -0.59
VPS8-227ENST00000625842 CACUL1Q86Y37 369 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 BRSK2Q8IWQ3 736 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 LRRC4BQ9NT99 713 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.38□□□□□ -0.59
VPS8-227ENST00000625842 GTF3C4Q9UKN8 822 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 PADI4Q9UM07 663 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 AP4E1Q9UPM8 1137 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 SNX24Q9Y343 169 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 TIMM13Q9Y5L4 95 aaPredicted RBP11.38□□□□□ -0.59
VPS8-227ENST00000625842 KATNA1O75449 491 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 PRKCZQ05513 592 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 SPIDRQ14159 915 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 EPM2AIP1Q7L775 607 aaPredicted RBP11.38□□□□□ -0.59
VPS8-227ENST00000625842 DHX40Q8IX18 779 aaKnown RBP11.38□□□□□ -0.59
VPS8-227ENST00000625842 EFCAB3Q8N7B9 438 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 PRCCQ92733 491 aaPredicted RBP11.38□□□□□ -0.59
VPS8-227ENST00000625842 STAMBPL1Q96FJ0 436 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 TRMT61BQ9BVS5 477 aaKnown RBP11.38□□□□□ -0.59
VPS8-227ENST00000625842 RIOX1Q9H6W3 641 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 ACTR8Q9H981 624 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 POPDC2Q9HBU9 364 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 SLC2A4RGQ9NR83 387 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 GALNT8Q9NY28 637 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 OGFRQ9NZT2 677 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 Q9Y3F1 56 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 CNTNAP5Q8WYK1 1306 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 NWD1Q149M9 1564 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 GOLGA8RI6L899 631 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 CST8O60676 142 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 CYP11B1P15538 503 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 RRM2P31350 389 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 TTC39BQ5VTQ0 682 aaPredicted RBP11.38□□□□□ -0.59
VPS8-227ENST00000625842 BHLHB9Q6PI77 547 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 SLC30A10Q6XR72 485 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 LRRC8AQ8IWT6 810 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 B4GALNT2Q8NHY0 566 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 HSFY1Q96LI6 401 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 AP1M1Q9BXS5 423 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 OSBPL8Q9BZF1 889 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 WWP1Q9H0M0 922 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 CAPN11Q9UMQ6 739 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 CAPN7Q9Y6W3 813 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 AGXTP21549 392 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 NTSP30990 170 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 RBM43Q6ZSC3 357 aaKnown RBP11.38□□□□□ -0.59
VPS8-227ENST00000625842 FBXL5Q9UKA1 691 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 DERAQ9Y315 318 aa11.38□□□□□ -0.59
VPS8-227ENST00000625842 WDR91A4D1P6 747 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 TRPC5OSA6NMA1 111 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 PER2O15055 1255 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 EIF2S1P05198 315 aaKnown RBP11.37□□□□□ -0.59
VPS8-227ENST00000625842 ITIH2P19823 946 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 IDSP22304 550 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 PTPN7P35236 360 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 NUP107P57740 925 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 AP2B1P63010 937 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 BIKQ13323 160 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 SARM1Q6SZW1 724 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 FAM172AQ8WUF8 416 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 MKL1Q969V6 931 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 ZFYVE19Q96K21 471 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 TBCDQ9BTW9 1192 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 TTLL2Q9BWV7 592 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 DUS2Q9NX74 493 aaKnown RBP11.37□□□□□ -0.59
VPS8-227ENST00000625842 COLEC10Q9Y6Z7 277 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 ZNF862O60290 1169 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 UCHL3P15374 230 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 IL2P60568 153 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 CYP20A1Q6UW02 462 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 LPCAT2Q7L5N7 544 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 NELL2Q99435 816 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 PITPNM3Q9BZ71 974 aa11.37□□□□□ -0.59
VPS8-227ENST00000625842 MORC2Q9Y6X9 1032 aaPredicted RBP11.37□□□□□ -0.59
VPS8-227ENST00000625842 TM9SF1O15321 606 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms