RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 RXRGP48443 463 aa14.61□□□□□ -0.07
SNX1-214ENST00000625244 GRIN1Q05586 938 aa14.61□□□□□ -0.07
SNX1-214ENST00000625244 EIF4HQ15056 248 aaKnown RBP14.61□□□□□ -0.07
SNX1-214ENST00000625244 C4orf17Q53FE4 359 aa14.61□□□□□ -0.07
SNX1-214ENST00000625244 PAQR9Q6ZVX9 377 aa14.61□□□□□ -0.07
SNX1-214ENST00000625244 ANKRD36BP1Q96IX9 119 aa14.61□□□□□ -0.07
SNX1-214ENST00000625244 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.61□□□□□ -0.07
SNX1-214ENST00000625244 AASDHPPTQ9NRN7 309 aa14.61□□□□□ -0.07
SNX1-214ENST00000625244 THSD1Q9NS62 852 aa14.61□□□□□ -0.07
SNX1-214ENST00000625244 NUDT5Q9UKK9 219 aa14.61□□□□□ -0.07
SNX1-214ENST00000625244 DOPEY1Q5JWR5 2465 aa14.61□□□□□ -0.07
SNX1-214ENST00000625244 VWA3AA6NCI4 1184 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 TRIM38O00635 465 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 SIGLEC6O43699 453 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 KLKB1P03952 638 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 DNTTP04053 509 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 ITGB6P18564 788 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 CR2P20023 1033 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 DDIT3P35638 169 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 NXPH1P58417 271 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 SKOR1P84550 965 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 ZBTB16Q05516 673 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 CCDC81Q6ZN84 652 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 FAM35AQ86V20 835 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 NOC3LQ8WTT2 800 aaKnown RBP14.6□□□□□ -0.07
SNX1-214ENST00000625244 CYB5D2Q8WUJ1 264 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 CBWD1Q9BRT8 395 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 STRA6Q9BX79 667 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 TMEM245Q9H330 911 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 DMAP1Q9NPF5 467 aaPredicted RBP14.6□□□□□ -0.07
SNX1-214ENST00000625244 CYLDQ9NQC7 956 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 PRSS16Q9NQE7 514 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 TLR8Q9NR97 1041 aaKnown RBP14.6□□□□□ -0.07
SNX1-214ENST00000625244 COMMD8Q9NX08 183 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 KCNK4Q9NYG8 393 aa14.6□□□□□ -0.07
SNX1-214ENST00000625244 SPTBN1Q01082 2364 aaKnown RBP14.6□□□□□ -0.07
SNX1-214ENST00000625244 LRBAP50851 2863 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 SPENQ96T58 3664 aaKnown RBP14.59□□□□□ -0.07
SNX1-214ENST00000625244 A8MXQ7 604 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 TLR4O00206 839 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 STC2O76061 302 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 LDHAP00338 332 aaKnown RBP14.59□□□□□ -0.07
SNX1-214ENST00000625244 GALCP54803 685 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 ARID5AQ03989 594 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 KCNJ12Q14500 433 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 E2F5Q15329 346 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 C8orf34Q49A92 452 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 FNDC3BQ53EP0 1204 aaKnown RBP14.59□□□□□ -0.07
SNX1-214ENST00000625244 NCEH1Q6PIU2 408 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 SFR1Q86XK3 245 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 ZMIZ2Q8NF64 920 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 HVCN1Q96D96 273 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 DEPDC7Q96QD5 511 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 MED10Q9BTT4 135 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 GZF1Q9H116 711 aaPredicted RBP14.59□□□□□ -0.07
SNX1-214ENST00000625244 PCIF1Q9H4Z3 704 aa14.59□□□□□ -0.07
SNX1-214ENST00000625244 A0A1W2PNU3 283 aaPredicted RBP14.58□□□□□ -0.08
SNX1-214ENST00000625244 TIMM44O43615 452 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 OPA1O60313 960 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 CSO75390 466 aaKnown RBP14.58□□□□□ -0.08
SNX1-214ENST00000625244 BEST1O76090 585 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 CST3P01034 146 aaPredicted RBP14.58□□□□□ -0.08
SNX1-214ENST00000625244 TNNC2P02585 160 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 GARTP22102 1010 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 PLA2G4AP47712 749 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 DUOXA2Q1HG44 320 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 ARL13BQ3SXY8 428 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 TTC31Q49AM3 519 aaPredicted RBP14.58□□□□□ -0.08
SNX1-214ENST00000625244 DYMQ7RTS9 669 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 SPATS2Q86XZ4 545 aaKnown RBP14.58□□□□□ -0.08
SNX1-214ENST00000625244 CCDC83Q8IWF9 413 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 RAD54LQ92698 747 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 SMOQ99835 787 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 ERVMER34-1Q9H9K5 563 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 NMUR1Q9HB89 426 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 SERGEFQ9UGK8 458 aa14.58□□□□□ -0.08
SNX1-214ENST00000625244 CYP26A1O43174 497 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 EFSO43281 561 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 SDC3O75056 442 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 AP1G2O75843 785 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 PRPF6O94906 941 aaKnown RBP14.57□□□□□ -0.08
SNX1-214ENST00000625244 FAM163BP0C2L3 166 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 ANAPC15P60006 121 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 TLE1Q04724 770 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 CLN3Q13286 438 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 SERINC3Q13530 473 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 L1TD1Q5T7N2 865 aaKnown RBP14.57□□□□□ -0.08
SNX1-214ENST00000625244 GANCQ8TET4 914 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 SMARCD1Q96GM5 515 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 ACCSQ96QU6 501 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 KRT82Q9NSB4 513 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 HSPBP1Q9NZL4 362 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 EXOC7Q9UPT5 735 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 SATB2Q9UPW6 733 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 PAXBP1Q9Y5B6 917 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 ATP8B3O60423 1300 aa14.57□□□□□ -0.08
SNX1-214ENST00000625244 FBN2P35556 2912 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 C10orf142B7Z368 130 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 RARGP13631 454 aa14.56□□□□□ -0.08
SNX1-214ENST00000625244 CHKAP35790 457 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms