RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 AGTPBP1Q9UPW5 1226 aa12.84□□□□□ -0.35
LITAF-221ENST00000622633 ARIH1Q9Y4X5 557 aaPredicted RBP12.84□□□□□ -0.35
LITAF-221ENST00000622633 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.83□□□□□ -0.36
LITAF-221ENST00000622633 ARHGAP10A1A4S6 786 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 C3orf70A6NLC5 250 aaPredicted RBP12.83□□□□□ -0.36
LITAF-221ENST00000622633 K7EPI3 171 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 ATP2A1O14983 1001 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 PFDN6O15212 129 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 DCTN3O75935 186 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 CLPTM1O96005 669 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 SRGAP2CP0DJJ0 459 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 UQCRBP14927 111 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 PSMA2P25787 234 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 PHKA2P46019 1235 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 GDF10P55107 478 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 TFAMQ00059 246 aaKnown RBP12.83□□□□□ -0.36
LITAF-221ENST00000622633 TFDP1Q14186 410 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 HIF1AQ16665 826 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 MSS51Q4VC12 460 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 TAF1BQ53T94 588 aaPredicted RBP12.83□□□□□ -0.36
LITAF-221ENST00000622633 PDSS2Q86YH6 399 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 WDR49Q8IV35 697 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 MICALL2Q8IY33 904 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 ACTL9Q8TC94 416 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 EME1Q96AY2 570 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 MED30Q96HR3 178 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 NIF3L1Q9GZT8 377 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 MAN1C1Q9NR34 630 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.83□□□□□ -0.36
LITAF-221ENST00000622633 DDX56Q9NY93 547 aaKnown RBP12.83□□□□□ -0.36
LITAF-221ENST00000622633 VPS51Q9UID3 782 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 SHOC2Q9UQ13 582 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 CLUHO75153 1309 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 FAM189A1O60320 539 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 GUCY1B2O75343 617 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 ITGBL1O95965 494 aaPredicted RBP12.83□□□□□ -0.36
LITAF-221ENST00000622633 S100BP04271 92 aaPredicted RBP12.83□□□□□ -0.36
LITAF-221ENST00000622633 KRT4P19013 534 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 IL1R2P27930 398 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 PTPN7P35236 360 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 ETV3P41162 512 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 OTUD4Q01804 1114 aaKnown RBP12.83□□□□□ -0.36
LITAF-221ENST00000622633 KCNC4Q03721 635 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 TRPC3Q13507 836 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 MOGSQ13724 837 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 SEPT6Q14141 434 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 TARBP2Q15633 366 aaKnown RBP12.83□□□□□ -0.36
LITAF-221ENST00000622633 PDK4Q16654 411 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 DUOXA2Q1HG44 320 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 SPDYAQ5MJ70 313 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 CATSPERGQ6ZRH7 1159 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 ARFGAP1Q8N6T3 406 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 OR6Y1Q8NGX8 325 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 JOSD2Q8TAC2 188 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 SUN5Q8TC36 379 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 ERLEC1Q96DZ1 483 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 BTBD10Q9BSF8 475 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 ZFYVE28Q9HCC9 887 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 CRNNQ9UBG3 495 aaPredicted RBP12.83□□□□□ -0.36
LITAF-221ENST00000622633 RABGEF1Q9UJ41 708 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 PCDHGA3Q9Y5H0 932 aa12.83□□□□□ -0.36
LITAF-221ENST00000622633 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.83□□□□□ -0.36
LITAF-221ENST00000622633 WDR91A4D1P6 747 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 AQP9O43315 295 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 TYROBPO43914 113 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 CST8O60676 142 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 EDF1O60869 148 aaKnown RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 TMCC2O75069 709 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 HAUS5O94927 633 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 FGFR1P11362 822 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 ESRRAP11474 423 aaPredicted RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 CD19P15391 556 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 HMOX2P30519 316 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 PPARGP37231 505 aaPredicted RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 ASPHQ12797 758 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 ACAP1Q15027 740 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 PDK3Q15120 406 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 DCAF15Q66K64 600 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 NIPAL1Q6NVV3 410 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 TTC23LQ6PF05 361 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 LVRNQ6Q4G3 990 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 ERI1Q8IV48 349 aaKnown RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 KIAA0319LQ8IZA0 1049 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 CENPSQ8N2Z9 138 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 LZTR1Q8N653 840 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 CPT1BQ92523 772 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 ZNF668Q96K58 619 aaPredicted RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 OSBPL6Q9BZF3 934 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 GRIP2Q9C0E4 1043 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 C12orf65Q9H3J6 166 aaKnown RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 NRBP2Q9NSY0 501 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 PSMC3IPQ9P2W1 217 aaPredicted RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 POLIQ9UNA4 740 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 MAD1L1Q9Y6D9 718 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 MYH9P35579 1960 aaKnown RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 TCRBV7S3A2A0A539 114 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 FOXD2O60548 495 aaPredicted RBP12.82□□□□□ -0.36
LITAF-221ENST00000622633 MSCO60682 206 aa12.82□□□□□ -0.36
LITAF-221ENST00000622633 CHEK2O96017 543 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms