RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ZNF541Q9H0D2 1346 aa8.53□□□□□ -1.04
PTPDC1-204ENST00000620992 STX7O15400 261 aaKnown RBP8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 MAP3K13O43283 966 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 USP12O75317 370 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 SKAP2O75563 359 aaPredicted RBP8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 PCDH8O95206 1070 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 CBX6O95503 412 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 EGFRP00533 1210 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 AP3M2P53677 418 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 PHEXP78562 749 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 HTRA3P83110 453 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 CDC42EP1Q00587 391 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 BTKQ06187 659 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 PDAP1Q13442 181 aaKnown RBP8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 EFTUD2Q15029 972 aaKnown RBP eCLIP8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 CGB2Q6NT52 195 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 C16orf46Q6P387 395 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 CXorf38Q8TB03 319 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 FAM172AQ8WUF8 416 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 CCDC138Q96M89 665 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 FAM167BQ9BTA0 163 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 PORCNQ9H237 461 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 C12orf65Q9H3J6 166 aaKnown RBP8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 CACNA2D2Q9NY47 1150 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 TRPM5Q9NZQ8 1165 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 SENP1Q9P0U3 644 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 LGALS13Q9UHV8 139 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 SLC27A5Q9Y2P5 690 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 CST3P01034 146 aaPredicted RBP8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 CCND1P24385 295 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 NAMPTP43490 491 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 C1QBPQ07021 282 aaKnown RBP8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 NR1H3Q13133 447 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 RBBP7Q16576 425 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 LRRC36Q1X8D7 754 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 MFSD4BQ5TF39 518 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 RASIP1Q5U651 963 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 PLEKHA7Q6IQ23 1121 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 SDE2Q6IQ49 451 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 ELMO2Q96JJ3 720 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 TRIM55Q9BYV6 548 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 APOBEC2Q9Y235 224 aaKnown RBP8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 MOXD2PA6NHM9 499 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 ZNF197O14709 1029 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 MAP3K7O43318 606 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 DGKIO75912 1065 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 UNC5CO95185 931 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 LGALS2P05162 132 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 HIST1H2AGP0C0S8 130 aaPredicted RBP8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 HIST1H2ADP20671 130 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 TNFSF9P41273 254 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 GAD2Q05329 585 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 MAP7Q14244 749 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 SLC1A5Q15758 541 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 GALNTL6Q49A17 601 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 TMEM63BQ5T3F8 832 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 CRELD2Q6UXH1 353 aaPredicted RBP8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 RDM1Q8NG50 284 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 SLC2A14Q8TDB8 520 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 TMEM174Q8WUU8 243 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 RXFP2Q8WXD0 754 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 HIST1H2AHQ96KK5 128 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 GMLQ99445 158 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 HIST1H2AJQ99878 128 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 H2AFJQ9BTM1 129 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 PLK2Q9NYY3 685 aa8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 COL11A2P13942 1736 aaPredicted RBP8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 SPTAN1Q13813 2472 aaKnown RBP8.52□□□□□ -1.05
PTPDC1-204ENST00000620992 STRNO43815 780 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 IL18RAPO95256 599 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 FGFR1P11362 822 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 GLRA2P23416 452 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 MAP4P27816 1152 aaKnown RBP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 CD52P31358 61 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 PTPN7P35236 360 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 CTCFP49711 727 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 PSEN2P49810 448 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 ADIGQ0VDE8 80 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 RIPK1Q13546 671 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 TFDP3Q5H9I0 405 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 ZNF484Q5JVG2 852 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 DENND5BQ6ZUT9 1274 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 C16orf59Q7L2K0 433 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 PHF13Q86YI8 300 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 RIBC1Q8N443 379 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 ACTL9Q8TC94 416 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 MTG1Q9BT17 334 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 BRD8Q9H0E9 1235 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 TASP1Q9H6P5 420 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 CYP4F12Q9HCS2 524 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 ARHGEF38Q9NXL2 777 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 PSMC3IPQ9P2W1 217 aaPredicted RBP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 CRLS1Q9UJA2 301 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 PCDHB12Q9Y5F1 795 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 B4GALT5O43286 388 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 ABCG1P45844 678 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 OTUD4Q01804 1114 aaKnown RBP8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 RNF43Q68DV7 783 aa8.51□□□□□ -1.05
PTPDC1-204ENST00000620992 CES3Q6UWW8 571 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms