RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 ERCC4Q92889 916 aaPredicted RBP9.16□□□□□ -0.94
TARDBP-222ENST00000620505 SIPA1Q96FS4 1042 aa9.16□□□□□ -0.94
TARDBP-222ENST00000620505 PIWIL1Q96J94 861 aaKnown RBP9.16□□□□□ -0.94
TARDBP-222ENST00000620505 CDK5RAP1Q96SZ6 601 aaKnown RBP9.16□□□□□ -0.94
TARDBP-222ENST00000620505 FAM124BQ9H5Z6 455 aaPredicted RBP9.16□□□□□ -0.94
TARDBP-222ENST00000620505 IL21RQ9HBE5 538 aa9.16□□□□□ -0.94
TARDBP-222ENST00000620505 ELOVL2Q9NXB9 296 aa9.16□□□□□ -0.94
TARDBP-222ENST00000620505 WSB2Q9NYS7 404 aaPredicted RBP9.16□□□□□ -0.94
TARDBP-222ENST00000620505 TSPAN16Q9UKR8 245 aa9.16□□□□□ -0.94
TARDBP-222ENST00000620505 SLC27A6Q9Y2P4 619 aa9.16□□□□□ -0.94
TARDBP-222ENST00000620505 NEUROG3Q9Y4Z2 214 aa9.16□□□□□ -0.94
TARDBP-222ENST00000620505 PCDHB9Q9Y5E1 797 aa9.16□□□□□ -0.94
TARDBP-222ENST00000620505 PCDH15Q96QU1 1955 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 FAM237AA0A1B0GTK4 181 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 TRIM49BA6NDI0 452 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 CETN3O15182 167 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 MSI1O43347 362 aaKnown RBP9.15□□□□□ -0.94
TARDBP-222ENST00000620505 ZBED1O96006 694 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 CALCAP01258 141 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 RDXP35241 583 aaKnown RBP9.15□□□□□ -0.94
TARDBP-222ENST00000620505 PRCPP42785 496 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 RGS7P49802 495 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 COPAP53621 1224 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 SLC8A3P57103 927 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 TRIP6Q15654 476 aaKnown RBP9.15□□□□□ -0.94
TARDBP-222ENST00000620505 FNDC3BQ53EP0 1204 aaKnown RBP9.15□□□□□ -0.94
TARDBP-222ENST00000620505 MPPE1Q53F39 396 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 SGO2Q562F6 1265 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 RAB41Q5JT25 222 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 ARHGAP17Q68EM7 881 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 BHLHA9Q7RTU4 235 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 NAXDQ8IW45 347 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 CPXM2Q8N436 756 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 ZNF276Q8N554 614 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 SETD7Q8WTS6 366 aaKnown RBP9.15□□□□□ -0.94
TARDBP-222ENST00000620505 RNF139Q8WU17 664 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 FOXJ1Q92949 421 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 LRRC4Q9HBW1 653 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 ITM2CQ9NQX7 267 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 DNAAF2Q9NVR5 837 aaKnown RBP9.15□□□□□ -0.94
TARDBP-222ENST00000620505 USP36Q9P275 1121 aaKnown RBP9.15□□□□□ -0.94
TARDBP-222ENST00000620505 HESX1Q9UBX0 185 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 SUSD2Q9UGT4 822 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 EIF2B4Q9UI10 523 aaKnown RBP9.15□□□□□ -0.94
TARDBP-222ENST00000620505 MSRB2Q9Y3D2 182 aa9.15□□□□□ -0.94
TARDBP-222ENST00000620505 MYO18AQ92614 2054 aaKnown RBP9.14□□□□□ -0.95
TARDBP-222ENST00000620505 CNOT1A5YKK6 2376 aaKnown RBP9.14□□□□□ -0.95
TARDBP-222ENST00000620505 A0A1B0GTW7 788 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 GOLGA6L7A0A1B0GV03 622 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 A0A1W2PQ27 194 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 A0A1W2PQ64 194 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 GOLGA8CPA6NN73 597 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 YJEFN3A6XGL0 299 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 METTL12A8MUP2 240 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 UPK3BL1B0FP48 263 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 UPK3BL2E5RIL1 263 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 E7ENQ6 273 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 XPO1O14980 1071 aaKnown RBP9.14□□□□□ -0.95
TARDBP-222ENST00000620505 BCAT2O15382 392 aaPredicted RBP9.14□□□□□ -0.95
TARDBP-222ENST00000620505 STX10O60499 249 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 GJB3O75712 270 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 FTH1P19P0C7X4 201 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 HOXD9P28356 352 aaPredicted RBP9.14□□□□□ -0.95
TARDBP-222ENST00000620505 HARS2P49590 506 aaKnown RBP9.14□□□□□ -0.95
TARDBP-222ENST00000620505 SGSHP51688 502 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 PMS1P54277 932 aaKnown RBP9.14□□□□□ -0.95
TARDBP-222ENST00000620505 CUL2Q13617 745 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 ENPP2Q13822 863 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 TRIP4Q15650 581 aaPredicted RBP9.14□□□□□ -0.95
TARDBP-222ENST00000620505 EDRF1Q3B7T1 1238 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 BSPRYQ5W0U4 402 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 ANKRD40Q6AI12 368 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 PM20D1Q6GTS8 502 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 ISM2Q6H9L7 571 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 CHST9Q7L1S5 443 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 SIX6OS1Q8N1H7 587 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 RBBP8NLQ8NC74 664 aaPredicted RBP9.14□□□□□ -0.95
TARDBP-222ENST00000620505 PLD4Q96BZ4 506 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 TMA16Q96EY4 203 aaKnown RBP9.14□□□□□ -0.95
TARDBP-222ENST00000620505 IPO9Q96P70 1041 aaKnown RBP9.14□□□□□ -0.95
TARDBP-222ENST00000620505 TSG101Q99816 390 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 UBXN6Q9BZV1 441 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 LHX5Q9H2C1 402 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 MTG2Q9H4K7 406 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 C6orf106Q9H6K1 298 aaPredicted RBP9.14□□□□□ -0.95
TARDBP-222ENST00000620505 GAREM1Q9H706 876 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 ABCB8Q9NUT2 735 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 STIM2Q9P246 746 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 SLCO1B1Q9Y6L6 691 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 CHD8Q9HCK8 2581 aa9.14□□□□□ -0.95
TARDBP-222ENST00000620505 USP24Q9UPU5 2620 aa9.13□□□□□ -0.95
TARDBP-222ENST00000620505 A0A1B0GVT2 93 aa9.13□□□□□ -0.95
TARDBP-222ENST00000620505 TMEM8BA6NDV4 472 aa9.13□□□□□ -0.95
TARDBP-222ENST00000620505 KCNK3O14649 394 aa9.13□□□□□ -0.95
TARDBP-222ENST00000620505 HLA-FP30511 346 aa9.13□□□□□ -0.95
TARDBP-222ENST00000620505 OXTRP30559 389 aa9.13□□□□□ -0.95
TARDBP-222ENST00000620505 ACSL1P33121 698 aa9.13□□□□□ -0.95
TARDBP-222ENST00000620505 CSNK1EP49674 416 aaKnown RBP9.13□□□□□ -0.95
TARDBP-222ENST00000620505 NUMBP49757 651 aa9.13□□□□□ -0.95
TARDBP-222ENST00000620505 BCAT1P54687 386 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms