RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CASC4Q6P4E1 433 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 KCNT2Q6UVM3 1135 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 EXOC8Q8IYI6 725 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 ZFAND2BQ8WV99 257 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 CPB2Q96IY4 423 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 SIKE1Q9BRV8 207 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 EBF3Q9H4W6 596 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 PIH1D1Q9NWS0 290 aaKnown RBP21.03■□□□□ 0.96
NEK3-208ENST00000618534 TRIP11Q15643 1979 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 TNS1Q9HBL0 1735 aaKnown RBP21.03■□□□□ 0.96
NEK3-208ENST00000618534 EVPLQ92817 2033 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 PLIN3O60664 434 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 SORBS2O94875 1100 aaKnown RBP21.03■□□□□ 0.96
NEK3-208ENST00000618534 SLC6A3Q01959 620 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 SEMA5AQ13591 1074 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 PCLAFQ15004 111 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 DBN1Q16643 649 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 LBX2Q6XYB7 198 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 MARK2Q7KZI7 788 aaKnown RBP21.03■□□□□ 0.96
NEK3-208ENST00000618534 RSPH3Q86UC2 560 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 TTC30AQ86WT1 665 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 NCAPG2Q86XI2 1143 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 KLRG1Q96E93 195 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 QKIQ96PU8 341 aaKnown RBP eCLIP21.03■□□□□ 0.96
NEK3-208ENST00000618534 B3GNT5Q9BYG0 378 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 SHCBP1LQ9BZQ2 653 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 TRIM4Q9C037 500 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 DHX35Q9H5Z1 703 aaKnown RBP21.03■□□□□ 0.96
NEK3-208ENST00000618534 XPNPEP3Q9NQH7 507 aa21.03■□□□□ 0.96
NEK3-208ENST00000618534 APOBEC2Q9Y235 224 aaKnown RBP21.03■□□□□ 0.96
NEK3-208ENST00000618534 A0A0G2JMZ2 1700 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 LRRC37A2A6NM11 1700 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 SIN3BO75182 1162 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 GLRA3O75311 464 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 RAB27AP51159 221 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 EPHB1P54762 984 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 TMEM132DQ14C87 1099 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 STXBP5Q5T5C0 1151 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 STEAP4Q687X5 459 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 PACS1Q6VY07 963 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 RNF111Q6ZNA4 994 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 PLPPR4Q7Z2D5 763 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 FAM192AQ9GZU8 254 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 PNPOQ9NVS9 261 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 MFHAS1Q9Y4C4 1052 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 GJA3Q9Y6H8 435 aa21.02■□□□□ 0.96
NEK3-208ENST00000618534 PAPSS1O43252 624 aaPredicted RBP21.02■□□□□ 0.95
NEK3-208ENST00000618534 RNASEH1O60930 286 aaKnown RBP21.02■□□□□ 0.95
NEK3-208ENST00000618534 PDE5AO76074 875 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 KLHL2O95198 593 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 COPAP53621 1224 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 NIPAL4Q0D2K0 466 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 LRRC36Q1X8D7 754 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 AAGABQ6PD74 315 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 DHDDSQ86SQ9 333 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 PPP2R3CQ969Q6 453 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 CLMNQ96JQ2 1002 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 GCOM2Q9BZD3 368 aaPredicted RBP21.02■□□□□ 0.95
NEK3-208ENST00000618534 R3HDMLQ9H3Y0 253 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 PDZD7Q9H5P4 517 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 ASB7Q9H672 318 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 IFT122Q9HBG6 1241 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 FAM49BQ9NUQ9 324 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 PRMT7Q9NVM4 692 aaPredicted RBP21.02■□□□□ 0.95
NEK3-208ENST00000618534 PSAT1Q9Y617 370 aa21.02■□□□□ 0.95
NEK3-208ENST00000618534 AP1G2O75843 785 aa21.01■□□□□ 0.95
NEK3-208ENST00000618534 GABBR2O75899 941 aa21.01■□□□□ 0.95
NEK3-208ENST00000618534 ALDH1A2O94788 518 aa21.01■□□□□ 0.95
NEK3-208ENST00000618534 MCF2P10911 925 aa21.01■□□□□ 0.95
NEK3-208ENST00000618534 CELF3Q5SZQ8 465 aaKnown RBP21.01■□□□□ 0.95
NEK3-208ENST00000618534 HEATR6Q6AI08 1181 aaKnown RBP21.01■□□□□ 0.95
NEK3-208ENST00000618534 ADGRG6Q86SQ4 1221 aa21.01■□□□□ 0.95
NEK3-208ENST00000618534 RIOX2Q8IUF8 465 aa21.01■□□□□ 0.95
NEK3-208ENST00000618534 C10orf107Q8IVU9 208 aa21.01■□□□□ 0.95
NEK3-208ENST00000618534 SORT1Q99523 831 aa21.01■□□□□ 0.95
NEK3-208ENST00000618534 STN1Q9H668 368 aaKnown RBP21.01■□□□□ 0.95
NEK3-208ENST00000618534 HESX1Q9UBX0 185 aa21.01■□□□□ 0.95
NEK3-208ENST00000618534 WDR90Q96KV7 1748 aa21.01■□□□□ 0.95
NEK3-208ENST00000618534 CCNT2O60583 730 aaKnown RBP21■□□□□ 0.95
NEK3-208ENST00000618534 ARRB2P32121 409 aa21■□□□□ 0.95
NEK3-208ENST00000618534 IDH3AP50213 366 aa21■□□□□ 0.95
NEK3-208ENST00000618534 CCNIQ14094 377 aa21■□□□□ 0.95
NEK3-208ENST00000618534 DPYSL2Q16555 572 aa21■□□□□ 0.95
NEK3-208ENST00000618534 OR6Y1Q8NGX8 325 aa21■□□□□ 0.95
NEK3-208ENST00000618534 ACMSDQ8TDX5 336 aa21■□□□□ 0.95
NEK3-208ENST00000618534 SPATA33Q96N06 139 aa21■□□□□ 0.95
NEK3-208ENST00000618534 KIAA1257Q9ULG3 409 aa21■□□□□ 0.95
NEK3-208ENST00000618534 PROCP04070 461 aa21■□□□□ 0.95
NEK3-208ENST00000618534 SERPINE1P05121 402 aa21■□□□□ 0.95
NEK3-208ENST00000618534 PRKCGP05129 697 aa21■□□□□ 0.95
NEK3-208ENST00000618534 VAV1P15498 845 aa21■□□□□ 0.95
NEK3-208ENST00000618534 YY1P25490 414 aa21■□□□□ 0.95
NEK3-208ENST00000618534 GMPRP36959 345 aa21■□□□□ 0.95
NEK3-208ENST00000618534 AMHR2Q16671 573 aa21■□□□□ 0.95
NEK3-208ENST00000618534 PKDCCQ504Y2 493 aa21■□□□□ 0.95
NEK3-208ENST00000618534 VWA5B1Q5TIE3 1220 aa21■□□□□ 0.95
NEK3-208ENST00000618534 ACOT1Q86TX2 421 aa21■□□□□ 0.95
NEK3-208ENST00000618534 SLC26A7Q8TE54 656 aa21■□□□□ 0.95
NEK3-208ENST00000618534 CCDC124Q96CT7 223 aaKnown RBP21■□□□□ 0.95
NEK3-208ENST00000618534 SLC4A5Q9BY07 1137 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms