RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 LAMTOR4Q0VGL1 99 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 GK3PQ14409 553 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 RBBP5Q15291 538 aaKnown RBP8.18□□□□□ -1.1
CHD7-212ENST00000618450 FAM187BQ17R55 369 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 INSCQ1MX18 579 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 PIGGQ5H8A4 983 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 MDH1BQ5I0G3 518 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 EFHC1Q5JVL4 640 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 NCBP2-AS2Q69YL0 99 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 CATSPERGQ6ZRH7 1159 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 IFNLR1Q8IU57 520 aaPredicted RBP8.18□□□□□ -1.1
CHD7-212ENST00000618450 FBXW8Q8N3Y1 598 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 TMEM102Q8N9M5 508 aaPredicted RBP8.18□□□□□ -1.1
CHD7-212ENST00000618450 PCSK1NQ9UHG2 260 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 MFHAS1Q9Y4C4 1052 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 TRIM64BA6NI03 449 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 TRIM64CA6NLI5 447 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 INHBAP08476 426 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 MYL4P12829 197 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 MLNP12872 115 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 YBX3P16989 372 aaKnown RBP eCLIP8.18□□□□□ -1.1
CHD7-212ENST00000618450 PTPRAP18433 802 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 PDK2Q15119 407 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 FASTKD1Q53R41 847 aaKnown RBP8.18□□□□□ -1.1
CHD7-212ENST00000618450 AP1ARQ63HQ0 302 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 EEF1DP3Q658K8 133 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 ATG16L1Q676U5 607 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 BORAQ6PGQ7 559 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 DENND5BQ6ZUT9 1274 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 SATL1Q86VE3 508 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 TTC30AQ86WT1 665 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 VPS52Q8N1B4 723 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 NT5C3BQ969T7 300 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 TMEM176AQ96HP8 235 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 NDNQ99608 321 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 ZNF696Q9H7X3 374 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 PNPOQ9NVS9 261 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.18□□□□□ -1.1
CHD7-212ENST00000618450 ARIH2O95376 493 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 ASLP04424 464 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 NFICP08651 508 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 CNTFP26441 200 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 GBE1Q04446 702 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 ORC1Q13415 861 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 PMF1Q6P1K2 205 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 HPS6Q86YV9 775 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 DNERQ8NFT8 737 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 RXFP2Q8WXD0 754 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 MCUR1Q96AQ8 359 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 CDHR1Q96JP9 859 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 FCRL3Q96P31 734 aaPredicted RBP8.18□□□□□ -1.1
CHD7-212ENST00000618450 COPG2Q9UBF2 871 aa8.18□□□□□ -1.1
CHD7-212ENST00000618450 SPDYE16A6NNV3 312 aaPredicted RBP8.17□□□□□ -1.1
CHD7-212ENST00000618450 MCF2LO15068 1137 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 SLC1A6P48664 564 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 ALDH18A1P54886 795 aaKnown RBP8.17□□□□□ -1.1
CHD7-212ENST00000618450 SARNPP82979 210 aaKnown RBP8.17□□□□□ -1.1
CHD7-212ENST00000618450 PLCB3Q01970 1234 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 STILQ15468 1287 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 SURF1Q15526 300 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 VWA5B1Q5TIE3 1220 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 ARMC3Q5W041 872 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 KCTD11Q693B1 232 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 PACS1Q6VY07 963 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 NUDCD3Q8IVD9 361 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 C10orf107Q8IVU9 208 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 NDUFAF2Q8N183 169 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 PLD6Q8N2A8 252 aaKnown RBP8.17□□□□□ -1.1
CHD7-212ENST00000618450 TAB3Q8N5C8 712 aaPredicted RBP8.17□□□□□ -1.1
CHD7-212ENST00000618450 PPM1NQ8N819 430 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 CNKSR2Q8WXI2 1034 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 NRDE2Q9H7Z3 1164 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 MYOZ2Q9NPC6 264 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 EIF2B3Q9NR50 452 aaKnown RBP8.17□□□□□ -1.1
CHD7-212ENST00000618450 DTLQ9NZJ0 730 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 TMEM216Q9P0N5 145 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 NYNRINQ9P2P1 1898 aaKnown RBP8.17□□□□□ -1.1
CHD7-212ENST00000618450 SOWAHBA6NEL2 793 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 SPECC1L-ADORA2AF8WAN1 911 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 KRT37O76014 449 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 ZNF26P17031 533 aaPredicted RBP8.17□□□□□ -1.1
CHD7-212ENST00000618450 OSBPP22059 807 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 ACAT1P24752 427 aaKnown RBP8.17□□□□□ -1.1
CHD7-212ENST00000618450 PCSK6P29122 969 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 EFNA5P52803 228 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 HADHQ16836 314 aaKnown RBP8.17□□□□□ -1.1
CHD7-212ENST00000618450 ANKRD20A4Q4UJ75 823 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 C16orf46Q6P387 395 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 CCDC62Q6P9F0 684 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 MPZL3Q6UWV2 235 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 RFX6Q8HWS3 928 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 TRIM42Q8IWZ5 723 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 CCDC33Q8N5R6 958 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 HSPH1Q92598 858 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 SNRNP25Q9BV90 132 aaKnown RBP8.17□□□□□ -1.1
CHD7-212ENST00000618450 INO80BQ9C086 356 aaPredicted RBP8.17□□□□□ -1.1
CHD7-212ENST00000618450 CDT1Q9H211 546 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 NDE1Q9NXR1 346 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 LMCD1Q9NZU5 365 aa8.17□□□□□ -1.1
CHD7-212ENST00000618450 MARCOQ9UEW3 520 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms