RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 CHD8Q9HCK8 2581 aa23.18■■□□□ 1.3
NEDD4L-237ENST00000617539 ACACBO00763 2458 aa23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 AP5Z1O43299 807 aa23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 LTFP02788 710 aa23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 RPL34P49207 117 aaKnown RBP23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 UBE2HP62256 183 aa23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 ZNF234Q14588 700 aa23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 MPPE1Q53F39 396 aa23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 TRIM61Q5EBN2 209 aa23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 N4BP2L1Q5TBK1 243 aaPredicted RBP23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 SLC36A4Q6YBV0 504 aa23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 SLC41A1Q8IVJ1 513 aa23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 HSFY1Q96LI6 401 aa23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 MKRN2Q9H000 416 aaKnown RBP23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 ELOVL2Q9NXB9 296 aa23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 RWDD2AQ9UIY3 292 aa23.17■■□□□ 1.3
NEDD4L-237ENST00000617539 ZNF217O75362 1048 aa23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 KCNK5O95279 499 aa23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 LATS1O95835 1130 aa23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 PRKCHP24723 683 aa23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 HLA-FP30511 346 aa23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 GPD2P43304 727 aa23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 ADGRF1Q5T601 910 aa23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 DENND1BQ6P3S1 775 aa23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 IRF2BP1Q8IU81 584 aa23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 MIS12Q9H081 205 aa23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 UBE2TQ9NPD8 197 aaPredicted RBP23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 ACP6Q9NPH0 428 aa23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 TMEM9BQ9NQ34 198 aa23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 TPRP12270 2363 aaKnown RBP23.16■■□□□ 1.3
NEDD4L-237ENST00000617539 ASCC3Q8N3C0 2202 aaKnown RBP23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 NPC1O15118 1278 aa23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 KRT5P13647 590 aa23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 APBA1Q02410 837 aa23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 ZNF33AQ06730 810 aa23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 EIF4HQ15056 248 aaKnown RBP23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 FAM133BQ5BKY9 247 aaKnown RBP23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 GJB7Q6PEY0 223 aa23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 TRIM65Q6PJ69 517 aa23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 KIAA1324Q6UXG2 1013 aaKnown RBP23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 CRACR2AQ9BSW2 395 aa23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 CIPCQ9C0C6 399 aa23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 FSCN3Q9NQT6 498 aa23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 CYTH4Q9UIA0 394 aa23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 FRYQ5TBA9 3013 aa23.15■■□□□ 1.3
NEDD4L-237ENST00000617539 EPG5Q9HCE0 2579 aa23.14■■□□□ 1.3
NEDD4L-237ENST00000617539 GOLGA6L7A0A1B0GV03 622 aa23.14■■□□□ 1.29
NEDD4L-237ENST00000617539 FBXO21O94952 628 aa23.14■■□□□ 1.29
NEDD4L-237ENST00000617539 NCAM1P13591 858 aa23.14■■□□□ 1.29
NEDD4L-237ENST00000617539 SLC6A4P31645 630 aa23.14■■□□□ 1.29
NEDD4L-237ENST00000617539 PSAPL1Q6NUJ1 521 aa23.14■■□□□ 1.29
NEDD4L-237ENST00000617539 RFWD3Q6PCD5 774 aa23.14■■□□□ 1.29
NEDD4L-237ENST00000617539 SLC23A3Q6PIS1 610 aa23.14■■□□□ 1.29
NEDD4L-237ENST00000617539 SCUBE3Q8IX30 993 aa23.14■■□□□ 1.29
NEDD4L-237ENST00000617539 WFDC5Q8TCV5 224 aa23.14■■□□□ 1.29
NEDD4L-237ENST00000617539 UCMAQ8WVF2 138 aa23.14■■□□□ 1.29
NEDD4L-237ENST00000617539 USP36Q9P275 1121 aaKnown RBP23.14■■□□□ 1.29
NEDD4L-237ENST00000617539 KMT2BQ9UMN6 2715 aaPredicted RBP23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 BECN2A8MW95 431 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 GIPC1O14908 333 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 ZBTB24O43167 697 aaPredicted RBP23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 FGFR1OPO95684 399 aaKnown RBP23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 ENGP17813 658 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 SLC9A1P19634 815 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 PMLP29590 882 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 HOXD12P35452 270 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 COPAP53621 1224 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 ZNF445P59923 1031 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 RING1Q06587 406 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 STARD3Q14849 445 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 NADSYN1Q6IA69 706 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 KIAA0907Q7Z7F0 614 aaPredicted RBP23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 DQX1Q8TE96 717 aaKnown RBP23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 TMA16Q96EY4 203 aaKnown RBP23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 MYEOVQ96EZ4 313 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 FCRL2Q96LA5 508 aaPredicted RBP23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 HSPA12BQ96MM6 686 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 PRDM16Q9HAZ2 1276 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 NAALADL1Q9UQQ1 740 aa23.13■■□□□ 1.29
NEDD4L-237ENST00000617539 KCNJ18B7U540 433 aa23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 LETM1O95202 739 aaPredicted RBP23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 TBX4P57082 545 aa23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 PIK3R6Q5UE93 754 aa23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 DAB2IPQ5VWQ8 1189 aa23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 METTL3Q86U44 580 aaKnown RBP23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 ADIPOR2Q86V24 386 aa23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 ZNF606Q8WXB4 792 aa23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 PRICKLE1Q96MT3 831 aaPredicted RBP23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 NUSAP1Q9BXS6 441 aaKnown RBP23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 SLC4A5Q9BY07 1137 aa23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 CAPN10Q9HC96 672 aa23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 ST7Q9NRC1 585 aa23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 ABCB8Q9NUT2 735 aa23.12■■□□□ 1.29
NEDD4L-237ENST00000617539 PAPSS1O43252 624 aaPredicted RBP23.11■■□□□ 1.29
NEDD4L-237ENST00000617539 ACSL4O60488 711 aa23.11■■□□□ 1.29
NEDD4L-237ENST00000617539 CFIP05156 583 aa23.11■■□□□ 1.29
NEDD4L-237ENST00000617539 DPP6P42658 865 aa23.11■■□□□ 1.29
NEDD4L-237ENST00000617539 MAPK8P45983 427 aa23.11■■□□□ 1.29
NEDD4L-237ENST00000617539 LMAN2Q12907 356 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms