RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 OR12D3Q9UGF7 316 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 DCDC2Q9UHG0 476 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 PSMB4P28070 264 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 CD52P31358 61 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 GRAMD1BQ3KR37 738 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 HSP90AA5PQ58FG0 334 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 TLCD1Q96CP7 247 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 LRRC39Q96DD0 335 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 GBP5Q96PP8 586 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 LPIN3Q9BQK8 851 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 MYH15Q9Y2K3 1946 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 TOMM70O94826 608 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 XPAP23025 273 aaPredicted RBP13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 AVPR1AP37288 418 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 GLRBP48167 497 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 GEMP55040 296 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 AQP5P55064 265 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 MRPS5P82675 430 aaKnown RBP13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 OGDHQ02218 1023 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 GHRHRQ02643 423 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 MPP3Q13368 585 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 ANKRD22Q5VYY1 191 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 ATP6V0D2Q8N8Y2 350 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 TMEM120AQ9BXJ8 343 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 DUSP16Q9BY84 665 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 STARD7Q9NQZ5 370 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 PDLIM7Q9NR12 457 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 NSMCE4AQ9NXX6 385 aa13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 TSR3Q9UJK0 312 aaKnown RBP13.57□□□□□ -0.24
PPP4R3B-206ENST00000616407 PPM1FP49593 454 aaPredicted RBP13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 POU6F1Q14863 301 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 EFTUD2Q15029 972 aaKnown RBP eCLIP13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 TFAP2DQ7Z6R9 452 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 PACS2Q86VP3 889 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 CD101Q93033 1021 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 ZBED2Q9BTP6 218 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 COLEC11Q9BWP8 271 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 TCRBV9S1A1TA0A576 114 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 C2CD4BA6NLJ0 364 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 TRDMT1O14717 391 aaKnown RBP13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 IL1R2P27930 398 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 MTFR1Q15390 333 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 RGMBQ6NW40 437 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 USP6NLQ92738 828 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 FAM167BQ9BTA0 163 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 FICDQ9BVA6 458 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 TMEM109Q9BVC6 243 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 DDX60LQ5H9U9 1706 aaKnown RBP13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 GOLGA8TH3BQL2 631 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 XPO1O14980 1071 aaKnown RBP13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 IRF1P10914 325 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 ERCC2P18074 760 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 EDNRBP24530 442 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 LMO2P25791 158 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 CNTFP26441 200 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 INHBEP58166 350 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 RNASEH2BQ5TBB1 312 aaKnown RBP13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 YTHDF3Q7Z739 585 aaKnown RBP13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 ARHGAP18Q8N392 663 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 SLC26A7Q8TE54 656 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 ATXN3LQ9H3M9 355 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 TRPC7Q9HCX4 862 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 MYH4Q9Y623 1939 aa13.56□□□□□ -0.24
PPP4R3B-206ENST00000616407 SLC12A8A0AV02 714 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 PAPSS1O43252 624 aaPredicted RBP13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 TIMM44O43615 452 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 TUBP50607 506 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 HIC1Q14526 733 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 FAM182AQ5T1J6 154 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 TMEM63BQ5T3F8 832 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 N4BP2L1Q5TBK1 243 aaPredicted RBP13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 TAS2R42Q7RTR8 314 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 EFHBQ8N7U6 833 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 SNX27Q96L92 541 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 HAPLN2Q9GZV7 340 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 SIX4Q9UIU6 781 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 DNAJC16Q9Y2G8 782 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 NRAPQ86VF7 1730 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 CHEK2O96017 543 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 GP5P40197 560 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 BRCC3P46736 316 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 GDF10P55107 478 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 PARP6Q2NL67 630 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 SLC39A12Q504Y0 691 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 FNBP1LQ5T0N5 605 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 C15orf39Q6ZRI6 1047 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 CNPY4Q8N129 248 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 GCNAQ96QF7 691 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 NUF2Q9BZD4 464 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 CDY1Q9Y6F8 540 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 E5RI56 91 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 FSBPO95073 299 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 CCND1P24385 295 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 RGS9BPQ6ZS82 235 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 TOP6BLQ8N6T0 577 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 OR52K1Q8NGK4 314 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 CALML6Q8TD86 181 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 PPP1R2P1Q96PQ5 205 aa13.55□□□□□ -0.24
PPP4R3B-206ENST00000616407 NT5MQ9NPB1 228 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms