RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SAC3D1A6NKF1 404 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 MT-CO1P00395 513 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 SERPINE1P05121 402 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 THRAP10827 490 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 ALOX15P16050 662 aaPredicted RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 GLRBP48167 497 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 PDAP1Q13442 181 aaKnown RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 SNAPC2Q13487 334 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 ZACNQ401N2 412 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 TEDDM1Q5T9Z0 273 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 GPR107Q5VW38 600 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 OGFOD2Q6N063 350 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 APOBEC3HQ6NTF7 200 aaKnown RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 DENND1BQ6P3S1 775 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 DRICH1Q6PGQ1 229 aaPredicted RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 MAP4K3Q8IVH8 894 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 THNSL1Q8IYQ7 743 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 ADGRF2Q8IZF7 708 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 SNX31Q8N9S9 440 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 DDHD1Q8NEL9 900 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 RIN3Q8TB24 985 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 UBA3Q8TBC4 463 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 FNDC8Q8TC99 324 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 SREK1Q8WXA9 508 aaKnown RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 RMND5BQ96G75 393 aaPredicted RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 PGLYRP2Q96PD5 576 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 OR52B2Q96RD2 323 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 ADPGKQ9BRR6 497 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 SLC4A5Q9BY07 1137 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 TSPYL2Q9H2G4 693 aaPredicted RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 TUT1Q9H6E5 874 aaKnown RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 PLGRKTQ9HBL7 147 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 TCF7L2Q9NQB0 619 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 CISHQ9NSE2 258 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 ZDHHC7Q9NXF8 308 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 ITGA11Q9UKX5 1188 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 TEX264Q9Y6I9 313 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 SF3B1O75533 1304 aaKnown RBP eCLIP6.86□□□□□ -1.31
LMO3-235ENST00000616247 PTPRJQ12913 1337 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 SPATA31A6Q5VVP1 1343 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 C10orf71Q711Q0 1435 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 SYNJ2BP-COX16A0A087WUM0 186 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 RNF103-CHMP3A0A140T963 221 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 RBM47A0AV96 593 aaKnown RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 AKAP10O43572 662 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 ZBTB14O43829 449 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 ZC3H11AO75152 810 aaKnown RBP eCLIP6.86□□□□□ -1.31
LMO3-235ENST00000616247 SPAG6O75602 509 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 CST3P01034 146 aaPredicted RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 CPA3P15088 417 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 RXRGP48443 463 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 RGS7P49802 495 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 CDH8P55286 799 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 C21orf59P57076 290 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 XIAPP98170 497 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 C15orf59Q2T9L4 293 aaPredicted RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 ANO4Q32M45 955 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 SLC9B1Q4ZJI4 515 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 SLC9A4Q6AI14 798 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 PRR5LQ6MZQ0 368 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 TTC33Q6PID6 262 aaPredicted RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 OLFML1Q6UWY5 402 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 ADGRG6Q86SQ4 1221 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 C12orf56Q8IXR9 622 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 DSELQ8IZU8 1212 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 DCLK2Q8N568 766 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 ZNF781Q8N8C0 355 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 FAM47BQ8NA70 645 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 SMYD1Q8NB12 490 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 CATSPER1Q8NEC5 780 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 PDCD6IPQ8WUM4 868 aaKnown RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 VCPIP1Q96JH7 1222 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 MAML3Q96JK9 1138 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 MFSD14AQ96MC6 490 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 C8orf37Q96NL8 207 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 AGAP3Q96P47 875 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 NPAS2Q99743 824 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 DHRS4Q9BTZ2 278 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 GCOM2Q9BZD3 368 aaPredicted RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 MTMR12Q9C0I1 747 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 C1orf21Q9H246 121 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 COQ10BQ9H8M1 238 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 RAVER2Q9HCJ3 691 aaKnown RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 TMEM216Q9P0N5 145 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 C6orf203Q9P0P8 240 aaPredicted RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 COX16Q9P0S2 106 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 PAK5Q9P286 719 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 FBXO40Q9UH90 709 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 USP18Q9UMW8 372 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 MYRFQ9Y2G1 1151 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 TTLL3Q9Y4R7 772 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 SPATA31A5Q5VU36 1347 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 SPATA31A7Q8IWB4 1347 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 PHLPP1O60346 1717 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 C1orf232A0A0U1RR37 186 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 APOC4-APOC2K7ER74 178 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 KLF11O14901 512 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 LRP5O75197 1615 aa6.86□□□□□ -1.31
LMO3-235ENST00000616247 ZBTB11O95625 1053 aaPredicted RBP6.86□□□□□ -1.31
LMO3-235ENST00000616247 APOC2P02655 101 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms