RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 CD59P13987 128 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 PRKCHP24723 683 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 COPAP53621 1224 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 FAM193AP78312 1265 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 LRMPQ12912 555 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 WDR45BQ5MNZ6 344 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 TMPRSS6Q8IU80 811 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 UBA3Q8TBC4 463 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 EDEM1Q92611 657 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 GATA6Q92908 595 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 SLC35C1Q96A29 364 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 IPO9Q96P70 1041 aaKnown RBP21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 GSDMAQ96QA5 445 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 GPR174Q9BXC1 333 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 SLC2A11Q9BYW1 496 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 DNAAF2Q9NVR5 837 aaKnown RBP21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 ZMIZ1Q9ULJ6 1067 aa21.71■■□□□ 1.07
TRAPPC3-208ENST00000616074 YJEFN3A6XGL0 299 aa21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 MEI4A8MW99 385 aa21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 E7ENQ6 273 aa21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 O00370 1275 aa21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 TSPAN3O60637 253 aa21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 NCAM1P13591 858 aa21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 GNSP15586 552 aa21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 HOXD9P28356 352 aaPredicted RBP21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 HARS2P49590 506 aaKnown RBP21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 TPMTP51580 245 aa21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 YWHAEP62258 255 aaKnown RBP21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 MPPE1Q53F39 396 aa21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 BSPRYQ5W0U4 402 aa21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 CACUL1Q86Y37 369 aa21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 KDF1Q8NAX2 398 aaPredicted RBP21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 RNF139Q8WU17 664 aa21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 SIPA1Q96FS4 1042 aa21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 ARMCX3Q9UH62 379 aaPredicted RBP21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 HBS1LQ9Y450 684 aaKnown RBP21.7■■□□□ 1.06
TRAPPC3-208ENST00000616074 GJB3O75712 270 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 EPHX1P07099 455 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 VDRP11473 427 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 LRRC63Q05C16 580 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 GRIK2Q13002 908 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 PKDCCQ504Y2 493 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 SERPINA13PQ6UXR4 307 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 SIX6OS1Q8N1H7 587 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 ENGASEQ8NFI3 743 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 SPATA20Q8TB22 786 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 KCTD13Q8WZ19 329 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 DNASE2BQ8WZ79 361 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 PRCCQ92733 491 aaPredicted RBP21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 STOML2Q9UJZ1 356 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 KLK13Q9UKR3 277 aa21.69■■□□□ 1.06
TRAPPC3-208ENST00000616074 MSI1O43347 362 aaKnown RBP21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 SETSIPP0DME0 302 aa21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 HLA-EP13747 358 aa21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 LCP1P13796 627 aa21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 TBXAS1P24557 533 aaPredicted RBP21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 HLA-FP30511 346 aa21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 DAOAP59103 153 aa21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 ARID5AQ03989 594 aa21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 E2F5Q15329 346 aa21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 DCAF12L1Q5VU92 463 aa21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 ZCCHC9Q8N567 271 aaKnown RBP21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 CADM4Q8NFZ8 388 aa21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 CAMK1GQ96NX5 476 aa21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 CNGB3Q9NQW8 809 aa21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 ABCC13Q9NSE7 274 aa21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 NEUROG3Q9Y4Z2 214 aa21.68■■□□□ 1.06
TRAPPC3-208ENST00000616074 A0A1B0GTW7 788 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 TIMM44O43615 452 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 SMC2O95347 1197 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 IGLV3-19P01714 112 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 ACADMP11310 421 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 OXTRP30559 389 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 FMO5P49326 533 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 SLC14A1Q13336 389 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 TMEM270Q6UE05 265 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 SCML4Q8N228 414 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 TFAP2BQ92481 460 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 SMARCE1Q969G3 411 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 MIR1-1HGQ9H1L0 117 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 RALYQ9UKM9 306 aaKnown RBP21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 KIAA1257Q9ULG3 409 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 NFE2L3Q9Y4A8 694 aa21.67■■□□□ 1.06
TRAPPC3-208ENST00000616074 TMEM8BA6NDV4 472 aa21.66■■□□□ 1.06
TRAPPC3-208ENST00000616074 PIK3R2O00459 728 aa21.66■■□□□ 1.06
TRAPPC3-208ENST00000616074 SH3BP5O60239 455 aa21.66■■□□□ 1.06
TRAPPC3-208ENST00000616074 GABBR2O75899 941 aa21.66■■□□□ 1.06
TRAPPC3-208ENST00000616074 LATS1O95835 1130 aa21.66■■□□□ 1.06
TRAPPC3-208ENST00000616074 RGS7P49802 495 aa21.66■■□□□ 1.06
TRAPPC3-208ENST00000616074 SGSHP51688 502 aa21.66■■□□□ 1.06
TRAPPC3-208ENST00000616074 ZNF445P59923 1031 aa21.66■■□□□ 1.06
TRAPPC3-208ENST00000616074 ADGRF1Q5T601 910 aa21.66■■□□□ 1.06
TRAPPC3-208ENST00000616074 LCLAT1Q6UWP7 414 aa21.66■■□□□ 1.06
TRAPPC3-208ENST00000616074 CYB5D2Q8WUJ1 264 aa21.66■■□□□ 1.06
TRAPPC3-208ENST00000616074 TMA16Q96EY4 203 aaKnown RBP21.66■■□□□ 1.06
TRAPPC3-208ENST00000616074 MSRB2Q9Y3D2 182 aa21.66■■□□□ 1.06
TRAPPC3-208ENST00000616074 NUMA1Q14980 2115 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 GOLGA6L4A6NEF3 574 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 METTL12A8MUP2 240 aa21.65■■□□□ 1.06
TRAPPC3-208ENST00000616074 PAEPP09466 180 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms