RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 SNX31Q8N9S9 440 aa9.5□□□□□ -0.89
COL12A1-211ENST00000615798 ATG16L2Q8NAA4 619 aa9.5□□□□□ -0.89
COL12A1-211ENST00000615798 PIGBQ92521 554 aa9.5□□□□□ -0.89
COL12A1-211ENST00000615798 RACGAP1Q9H0H5 632 aa9.5□□□□□ -0.89
COL12A1-211ENST00000615798 MROH7-TTC4A0A0A0MT08 1334 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 RICTORQ6R327 1708 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 DOCK9Q9BZ29 2069 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 H3BMM5 538 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 OIP5O43482 229 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 AKAP8O43823 692 aaKnown RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 FNTAP49354 379 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 KDM7AQ6ZMT4 941 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 MAEAQ7L5Y9 396 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 CAMK1DQ8IU85 385 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 IL18R1Q13478 541 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 KCTD14Q9BQ13 255 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 TTC26A0AVF1 554 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 FAM172BPA6NC97 362 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 CES2O00748 559 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 NAMPTP43490 491 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 CDK8P49336 464 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 SPATA4Q8NEY3 305 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 SGF29Q96ES7 293 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 ADPGKQ9BRR6 497 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 TRPM5Q9NZQ8 1165 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 PDLIM1O00151 329 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 DLATP10515 647 aaKnown RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 TFAMQ00059 246 aaKnown RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 CNTN1Q12860 1018 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 ZCCHC8Q6NZY4 707 aaKnown RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 CHSY1Q86X52 802 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 TRIM2Q9C040 744 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 MARCOQ9UEW3 520 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 FAM237AA0A1B0GTK4 181 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 NADKO95544 446 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 ROR1Q01973 937 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 TTC39BQ5VTQ0 682 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 EXOC3L1Q86VI1 746 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 PLCZ1Q86YW0 608 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 OR52K2Q8NGK3 314 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 GTPBP2Q9BX10 602 aaKnown RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 FAM220BPB1ANY3 271 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 CD3EAPO15446 510 aaKnown RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 IL1R1P14778 569 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 ATP6V1B2P21281 511 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 PRCPP42785 496 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 ACADVLP49748 655 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 GALK1P51570 392 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 ZNF235Q14590 738 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 CA9Q16790 459 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 XKR9Q5GH70 373 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 SPDYCQ5MJ68 293 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 EGFLAMQ63HQ2 1017 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 TC2NQ8N9U0 490 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 IFT43Q96FT9 208 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 CCDC74BQ96LY2 380 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 C8orf37Q96NL8 207 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 PI4K2AQ9BTU6 479 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 SPASTQ9UBP0 616 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 POLR3HQ9Y535 204 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 C15orf38-AP3S2A0A0A6YYH1 394 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 MMP14P50281 582 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 POMGNT2Q8NAT1 580 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 GJA10Q969M2 543 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 FAM167AQ96KS9 214 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 RBM47A0AV96 593 aaKnown RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 MGRN1O60291 552 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 ACADSBP45954 432 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 RNF151Q2KHN1 245 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 FAM102BQ5T8I3 360 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 C10orf53Q8N6V4 93 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 METTL6Q8TCB7 284 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 FRMD8Q9BZ67 464 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 CROTQ9UKG9 612 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 ICE1Q9Y2F5 2266 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 HLA-DRAP01903 254 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 NCK1P16333 377 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 GPC5P78333 572 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 TFDP2Q14188 446 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 KYAT1Q16773 422 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 PLET1Q6UQ28 207 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 NIM1KQ8IY84 436 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 TCEAL7Q9BRU2 100 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 SLC25A13Q9UJS0 675 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 PLAGL2Q9UPG8 496 aa9.49□□□□□ -0.89
COL12A1-211ENST00000615798 KDM6AO15550 1401 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-211ENST00000615798 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 PRIM2P49643 509 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 FXR2P51116 673 aaKnown RBP eCLIP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 RC3H1Q5TC82 1133 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 RBM12BQ8IXT5 1001 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 USP38Q8NB14 1042 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 SMG7Q92540 1137 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 SRPK1Q96SB4 655 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 ARHGAP28Q9P2N2 729 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 FNDC3AQ9Y2H6 1198 aaKnown RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 ARL5CA6NH57 179 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 PTX3P26022 381 aaPredicted RBP9.48□□□□□ -0.89
COL12A1-211ENST00000615798 CASP12Q6UXS9 341 aa9.48□□□□□ -0.89
COL12A1-211ENST00000615798 AGR3Q8TD06 166 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms