RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 LIX1LQ8IVB5 337 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 C16orf71Q8IYS4 520 aaPredicted RBP3□□□□□ -1.93
HMGB1P24-202ENST00000615653 SPICE1Q8N0Z3 855 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 C16orf52Q8NHV5 167 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 ZNF622Q969S3 477 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB1P24-202ENST00000615653 SKA1Q96BD8 255 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 EDC3Q96F86 508 aaKnown RBP3□□□□□ -1.93
HMGB1P24-202ENST00000615653 SLC39A13Q96H72 371 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 TSPAN18Q96SJ8 248 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 HERPUD2Q9BSE4 406 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 COLEC11Q9BWP8 271 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 RNF26Q9BY78 433 aaPredicted RBP3□□□□□ -1.93
HMGB1P24-202ENST00000615653 ZBTB26Q9HCK0 441 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 CHST12Q9NRB3 414 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 TRNAU1APQ9NX07 287 aaKnown RBP3□□□□□ -1.93
HMGB1P24-202ENST00000615653 TAGLN3Q9UI15 199 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 FZD4Q9ULV1 537 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 HPSEQ9Y251 543 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 SLC27A6Q9Y2P4 619 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 SNX13Q9Y5W8 968 aa3□□□□□ -1.93
HMGB1P24-202ENST00000615653 RHPN2P1A8MT19 583 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 AGPSO00116 658 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 CNOT3O75175 753 aaKnown RBP2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 GAS8-AS1O95177 125 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 RPN1P04843 607 aaKnown RBP2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 TMEM225BP0DP42 221 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 TACR3P29371 465 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 HTR7P34969 479 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 THBS4P35443 961 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 CCT5P48643 541 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 RPS13P62277 151 aaKnown RBP2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 GPC5P78333 572 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 ID2Q02363 134 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 CFHR1Q03591 330 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 CCDC15Q0P6D6 951 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 KCNAB1Q14722 419 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 MFSD13AQ14CX5 517 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 CCDC96Q2M329 555 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 HYIQ5T013 277 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 CC2D1BQ5T0F9 858 aaKnown RBP2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 C10orf25Q5T742 122 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 CLEC9AQ6UXN8 241 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 GSG1LQ6UXU4 331 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 RANBP10Q6VN20 620 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 MMS22LQ6ZRQ5 1243 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 BEND5Q7L4P6 421 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 KRT77Q7Z794 578 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 UBE2Q1Q7Z7E8 422 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 FTSJ3Q8IY81 847 aaKnown RBP2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 FSTL5Q8N475 847 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 METTL25Q8N6Q8 603 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 MAP4K1Q92918 833 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 ERP27Q96DN0 273 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 KAZALD1Q96I82 304 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 EIF2AQ9BY44 585 aaKnown RBP2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 SLC25A32Q9H2D1 315 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 PTPRHQ9HD43 1115 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 RXFP3Q9NSD7 469 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 TXLNGQ9NUQ3 528 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 LUZP4Q9P127 313 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 LPAR3Q9UBY5 353 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 ISY1Q9ULR0 285 aaKnown RBP2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 NAP1L2Q9ULW6 460 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 DAAM1Q9Y4D1 1078 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 ZMYM2Q9UBW7 1377 aa2.99□□□□□ -1.93
HMGB1P24-202ENST00000615653 A0A1W2PRQ8 180 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 CLIC1O00299 241 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 AREL1O15033 823 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 CCNT2O60583 730 aaKnown RBP2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 MYL4P12829 197 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 TRIM27P14373 513 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 IDEP14735 1019 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 ATF7P17544 494 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 MATN1P21941 496 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 HTR3AP46098 478 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 THBS3P49746 956 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 JAK3P52333 1124 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 GPS1Q13098 491 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 ACOX1Q15067 660 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 RABEP1Q15276 862 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 PFKFB3Q16875 520 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 FAM83BQ5T0W9 1011 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 MRNIPQ6NTE8 343 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 SHC4Q6S5L8 630 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 MORC1Q86VD1 984 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 ZSCAN30Q86W11 494 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 P3H2Q8IVL5 708 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 CHCHD4Q8N4Q1 142 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 NANOGP1Q8N7R0 232 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 FAM71DQ8N9W8 422 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 ATP11CQ8NB49 1132 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 ACRBPQ8NEB7 543 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 MPLKIPQ8TAP9 179 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 SUN3Q8TAQ9 357 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 IPO4Q8TEX9 1081 aaKnown RBP2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 ABHD5Q8WTS1 349 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 NSMCE1Q8WV22 266 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 MPP4Q96JB8 637 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 TNIP3Q96KP6 325 aa2.98□□□□□ -1.93
HMGB1P24-202ENST00000615653 SIGLEC11Q96RL6 698 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms