RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 MPPE1Q53F39 396 aa18.67■□□□□ 0.58
SMN2-213ENST00000614240 DCAF17Q5H9S7 520 aaPredicted RBP18.67■□□□□ 0.58
SMN2-213ENST00000614240 RAB41Q5JT25 222 aa18.67■□□□□ 0.58
SMN2-213ENST00000614240 FMNL3Q8IVF7 1028 aa18.67■□□□□ 0.58
SMN2-213ENST00000614240 SETD7Q8WTS6 366 aaKnown RBP18.67■□□□□ 0.58
SMN2-213ENST00000614240 SNX19Q92543 992 aa18.67■□□□□ 0.58
SMN2-213ENST00000614240 NDRG1Q92597 394 aaKnown RBP18.67■□□□□ 0.58
SMN2-213ENST00000614240 PLA2G4CQ9UP65 541 aa18.67■□□□□ 0.58
SMN2-213ENST00000614240 PCDH15Q96QU1 1955 aa18.66■□□□□ 0.58
SMN2-213ENST00000614240 FAM237AA0A1B0GTK4 181 aa18.66■□□□□ 0.58
SMN2-213ENST00000614240 ZNF202O95125 648 aa18.66■□□□□ 0.58
SMN2-213ENST00000614240 BCAT1P54687 386 aa18.66■□□□□ 0.58
SMN2-213ENST00000614240 YWHAEP62258 255 aaKnown RBP18.66■□□□□ 0.58
SMN2-213ENST00000614240 TRIP4Q15650 581 aaPredicted RBP18.66■□□□□ 0.58
SMN2-213ENST00000614240 ZCWPW2Q504Y3 356 aa18.66■□□□□ 0.58
SMN2-213ENST00000614240 FNDC3BQ53EP0 1204 aaKnown RBP18.66■□□□□ 0.58
SMN2-213ENST00000614240 SGO2Q562F6 1265 aa18.66■□□□□ 0.58
SMN2-213ENST00000614240 PM20D1Q6GTS8 502 aa18.66■□□□□ 0.58
SMN2-213ENST00000614240 RAB44Q7Z6P3 723 aaPredicted RBP18.66■□□□□ 0.58
SMN2-213ENST00000614240 SMYD4Q8IYR2 804 aaPredicted RBP18.66■□□□□ 0.58
SMN2-213ENST00000614240 SIX6OS1Q8N1H7 587 aa18.66■□□□□ 0.58
SMN2-213ENST00000614240 EDEM1Q92611 657 aa18.66■□□□□ 0.58
SMN2-213ENST00000614240 GAREM1Q9H706 876 aa18.66■□□□□ 0.58
SMN2-213ENST00000614240 EIF2B4Q9UI10 523 aaKnown RBP18.66■□□□□ 0.58
SMN2-213ENST00000614240 APOBEC2Q9Y235 224 aaKnown RBP18.66■□□□□ 0.58
SMN2-213ENST00000614240 ATP6V1DQ9Y5K8 247 aa18.66■□□□□ 0.58
SMN2-213ENST00000614240 A0A1W2PQ27 194 aa18.65■□□□□ 0.58
SMN2-213ENST00000614240 A0A1W2PQ64 194 aa18.65■□□□□ 0.58
SMN2-213ENST00000614240 XPO1O14980 1071 aaKnown RBP18.65■□□□□ 0.58
SMN2-213ENST00000614240 CER1O95813 267 aa18.65■□□□□ 0.58
SMN2-213ENST00000614240 FTH1P19P0C7X4 201 aa18.65■□□□□ 0.58
SMN2-213ENST00000614240 HLA-EP13747 358 aa18.65■□□□□ 0.58
SMN2-213ENST00000614240 MATKP42679 507 aa18.65■□□□□ 0.58
SMN2-213ENST00000614240 PDE4CQ08493 712 aa18.65■□□□□ 0.58
SMN2-213ENST00000614240 BST2Q10589 180 aaKnown RBP18.65■□□□□ 0.58
SMN2-213ENST00000614240 IL27RAQ6UWB1 636 aa18.65■□□□□ 0.58
SMN2-213ENST00000614240 PNPLA1Q8N8W4 532 aa18.65■□□□□ 0.58
SMN2-213ENST00000614240 OR2T3Q8NH03 318 aa18.65■□□□□ 0.58
SMN2-213ENST00000614240 TMA16Q96EY4 203 aaKnown RBP18.65■□□□□ 0.58
SMN2-213ENST00000614240 TSG101Q99816 390 aa18.65■□□□□ 0.58
SMN2-213ENST00000614240 SCAND2PQ9GZW5 306 aaPredicted RBP18.65■□□□□ 0.58
SMN2-213ENST00000614240 SFMBT1Q9UHJ3 866 aa18.65■□□□□ 0.58
SMN2-213ENST00000614240 TSPAN16Q9UKR8 245 aa18.65■□□□□ 0.58
SMN2-213ENST00000614240 HBS1LQ9Y450 684 aaKnown RBP18.65■□□□□ 0.58
SMN2-213ENST00000614240 CACNA1GO43497 2377 aa18.64■□□□□ 0.58
SMN2-213ENST00000614240 FAM208BQ5VWN6 2430 aa18.64■□□□□ 0.58
SMN2-213ENST00000614240 FRYQ5TBA9 3013 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 FAM221BA6H8Z2 402 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 TULP2O00295 520 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 COPAP53621 1224 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 ZNF445P59923 1031 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 ADIGQ0VDE8 80 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 CUL2Q13617 745 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 BSPRYQ5W0U4 402 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 TMEM215Q68D42 235 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 CHST9Q7L1S5 443 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 FAM217AQ8IXS0 508 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 UBA3Q8TBC4 463 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 WFIKKN2Q8TEU8 576 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 ADAMTS14Q8WXS8 1223 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 LHX5Q9H2C1 402 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 GOLPH3LQ9H4A5 285 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 IL21RQ9HBE5 538 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 LHX6Q9UPM6 363 aa18.64■□□□□ 0.57
SMN2-213ENST00000614240 IGLV3-19P01714 112 aa18.63■□□□□ 0.57
SMN2-213ENST00000614240 HOXD9P28356 352 aaPredicted RBP18.63■□□□□ 0.57
SMN2-213ENST00000614240 MCCD1P59942 119 aaPredicted RBP18.63■□□□□ 0.57
SMN2-213ENST00000614240 LRMPQ12912 555 aa18.63■□□□□ 0.57
SMN2-213ENST00000614240 HLA-BQ31612 363 aa18.63■□□□□ 0.57
SMN2-213ENST00000614240 CBWD6Q4V339 395 aa18.63■□□□□ 0.57
SMN2-213ENST00000614240 CBWD3Q5JTY5 395 aa18.63■□□□□ 0.57
SMN2-213ENST00000614240 CBWD5Q5RIA9 395 aa18.63■□□□□ 0.57
SMN2-213ENST00000614240 ADGRF1Q5T601 910 aa18.63■□□□□ 0.57
SMN2-213ENST00000614240 RBBP8NLQ8NC74 664 aaPredicted RBP18.63■□□□□ 0.57
SMN2-213ENST00000614240 CYB5D2Q8WUJ1 264 aa18.63■□□□□ 0.57
SMN2-213ENST00000614240 PCED1AQ9H1Q7 454 aa18.63■□□□□ 0.57
SMN2-213ENST00000614240 TM7SF3Q9NS93 570 aa18.63■□□□□ 0.57
SMN2-213ENST00000614240 ABCB8Q9NUT2 735 aa18.63■□□□□ 0.57
SMN2-213ENST00000614240 RMND1Q9NWS8 449 aa18.63■□□□□ 0.57
SMN2-213ENST00000614240 ZDHHC9Q9Y397 364 aa18.63■□□□□ 0.57
SMN2-213ENST00000614240 A0A1B0GVT2 93 aa18.62■□□□□ 0.57
SMN2-213ENST00000614240 VDRP11473 427 aa18.62■□□□□ 0.57
SMN2-213ENST00000614240 LCP1P13796 627 aa18.62■□□□□ 0.57
SMN2-213ENST00000614240 HLA-FP30511 346 aa18.62■□□□□ 0.57
SMN2-213ENST00000614240 CSNK1EP49674 416 aaKnown RBP18.62■□□□□ 0.57
SMN2-213ENST00000614240 RING1Q06587 406 aa18.62■□□□□ 0.57
SMN2-213ENST00000614240 CAMK2GQ13555 558 aaPredicted RBP18.62■□□□□ 0.57
SMN2-213ENST00000614240 ZNF366Q8N895 744 aa18.62■□□□□ 0.57
SMN2-213ENST00000614240 ABCC13Q9NSE7 274 aa18.62■□□□□ 0.57
SMN2-213ENST00000614240 GGA2Q9UJY4 613 aa18.62■□□□□ 0.57
SMN2-213ENST00000614240 PCOLCE2Q9UKZ9 415 aa18.62■□□□□ 0.57
SMN2-213ENST00000614240 FNDC3AQ9Y2H6 1198 aaKnown RBP18.62■□□□□ 0.57
SMN2-213ENST00000614240 YJEFN3A6XGL0 299 aa18.61■□□□□ 0.57
SMN2-213ENST00000614240 E7ENQ6 273 aa18.61■□□□□ 0.57
SMN2-213ENST00000614240 SLC16A3O15427 465 aaKnown RBP18.61■□□□□ 0.57
SMN2-213ENST00000614240 MSI1O43347 362 aaKnown RBP18.61■□□□□ 0.57
SMN2-213ENST00000614240 ATP5BP06576 529 aaKnown RBP18.61■□□□□ 0.57
SMN2-213ENST00000614240 ZNF883P0CG24 379 aa18.61■□□□□ 0.57
SMN2-213ENST00000614240 SETSIPP0DME0 302 aa18.61■□□□□ 0.57
SMN2-213ENST00000614240 PABPC1P11940 636 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms