RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	SLC6A17	Q9H1V8	727 aa		11.64	□□□□□ -0.55
CBWD1-222	ENST00000613508	CD93	Q9NPY3	652 aa		11.64	□□□□□ -0.55
CBWD1-222	ENST00000613508	CNGB3	Q9NQW8	809 aa		11.64	□□□□□ -0.55
CBWD1-222	ENST00000613508	WSB2	Q9NYS7	404 aa	Predicted RBP	11.64	□□□□□ -0.55
CBWD1-222	ENST00000613508	HESX1	Q9UBX0	185 aa		11.64	□□□□□ -0.55
CBWD1-222	ENST00000613508	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.64	□□□□□ -0.55
CBWD1-222	ENST00000613508	NEUROG3	Q9Y4Z2	214 aa		11.64	□□□□□ -0.55
CBWD1-222	ENST00000613508	ITPR1	Q14643	2758 aa		11.64	□□□□□ -0.55
CBWD1-222	ENST00000613508	CEP192	Q8TEP8	1941 aa		11.64	□□□□□ -0.55
CBWD1-222	ENST00000613508	FAM221B	A6H8Z2	402 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	YJEFN3	A6XGL0	299 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	C1QTNF9B	B2RNN3	333 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508		E7ENQ6	273 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508		H0Y626	953 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	SYNCRIP	O60506	623 aa	Known RBP	11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	OPHN1	O60890	802 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	SMC2	O95347	1197 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	TRIM16	O95361	564 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	HMBS	P08397	361 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	PAEP	P09466	180 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	C1QTNF9	P0C862	333 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	VDR	P11473	427 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	NCAM1	P13591	858 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	GNS	P15586	552 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	HOXD9	P28356	352 aa	Predicted RBP	11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	HARS2	P49590	506 aa	Known RBP	11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	TPMT	P51580	245 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	COPA	P53621	1224 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	PMS1	P54277	932 aa	Known RBP	11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	ZNF234	Q14588	700 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	MPPE1	Q53F39	396 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	MPP7	Q5T2T1	576 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	ADGRF1	Q5T601	910 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	TCERG1L	Q5VWI1	586 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	BSPRY	Q5W0U4	402 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	TMEM215	Q68D42	235 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	MSANTD2	Q6P1R3	559 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	FOXR2	Q6PJQ5	311 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	LCLAT1	Q6UWP7	414 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	FMNL3	Q8IVF7	1028 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	ELOA2	Q8IYF1	753 aa	Predicted RBP	11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	DDI1	Q8WTU0	396 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	TOE1	Q96GM8	510 aa	Known RBP	11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	TIGD1	Q96MW7	591 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	IPO9	Q96P70	1041 aa	Known RBP	11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	SCNM1	Q9BWG6	230 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	GTPBP2	Q9BX10	602 aa	Known RBP	11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	LRRC4	Q9HBW1	653 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	GDPD2	Q9HCC8	539 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	METTL14	Q9HCE5	456 aa	Known RBP	11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	FSCN3	Q9NQT6	498 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	ABCC13	Q9NSE7	274 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	CLEC4E	Q9ULY5	219 aa		11.63	□□□□□ -0.55
CBWD1-222	ENST00000613508	FAM208B	Q5VWN6	2430 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	LAMA5	O15230	3695 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	PKD1L2	Q7Z442	2459 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	KCNJ18	B7U540	433 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	TOP3B	O95985	862 aa	Known RBP	11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	IGLV3-27	P01718	113 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	PRKCH	P24723	683 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	SIM1	P81133	766 aa	Predicted RBP	11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	RING1	Q06587	406 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	ADIG	Q0VDE8	80 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	CAMK2G	Q13555	558 aa	Predicted RBP	11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	PLEKHG6	Q3KR16	790 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	TMPRSS6	Q8IU80	811 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	SIX6OS1	Q8N1H7	587 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	WFIKKN2	Q8TEU8	576 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	RNF139	Q8WU17	664 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	SLC35F5	Q8WV83	523 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	IRGQ	Q8WZA9	623 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	NDRG1	Q92597	394 aa	Known RBP	11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	PRCC	Q92733	491 aa	Predicted RBP	11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	AZIN2	Q96A70	460 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	SIPA1	Q96FS4	1042 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	NUP58	Q9BVL2	599 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	TMEM245	Q9H330	911 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	CKAP5	Q14008	2032 aa		11.62	□□□□□ -0.55
CBWD1-222	ENST00000613508	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508		A0A1B0GTW7	788 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	SPAAR	A0A1B0GVQ0	90 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	METTL12	A8MUP2	240 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	GABBR2	O75899	941 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	ZNF883	P0CG24	379 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	CD19	P15391	556 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	SPINK2	P20155	84 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	HLA-F	P30511	346 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	PPP1R2	P41236	205 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	FMO5	P49326	533 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	DAOA	P59103	153 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	GRIK2	Q13002	908 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	STIL	Q15468	1287 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	CNGA2	Q16280	664 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	ZNF423	Q2M1K9	1284 aa		11.61	□□□□□ -0.55
CBWD1-222	ENST00000613508	SERPINA13P	Q6UXR4	307 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms