RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CHKAP35790 457 aa24.55■■□□□ 1.52
MMP28-203ENST00000612672 PPP3CAQ08209 521 aa24.55■■□□□ 1.52
MMP28-203ENST00000612672 FOXD4L6Q3SYB3 417 aaPredicted RBP24.55■■□□□ 1.52
MMP28-203ENST00000612672 IL27RAQ6UWB1 636 aa24.55■■□□□ 1.52
MMP28-203ENST00000612672 FOXD4L3Q6VB84 417 aaPredicted RBP24.55■■□□□ 1.52
MMP28-203ENST00000612672 BHLHA9Q7RTU4 235 aa24.55■■□□□ 1.52
MMP28-203ENST00000612672 CYB5D2Q8WUJ1 264 aa24.55■■□□□ 1.52
MMP28-203ENST00000612672 UCMAQ8WVF2 138 aa24.55■■□□□ 1.52
MMP28-203ENST00000612672 NDRG1Q92597 394 aaKnown RBP24.55■■□□□ 1.52
MMP28-203ENST00000612672 ORAI3Q9BRQ5 295 aa24.55■■□□□ 1.52
MMP28-203ENST00000612672 TM9SF3Q9HD45 589 aa24.55■■□□□ 1.52
MMP28-203ENST00000612672 SERTAD1Q9UHV2 236 aa24.55■■□□□ 1.52
MMP28-203ENST00000612672 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.55■■□□□ 1.52
MMP28-203ENST00000612672 RALAP11233 206 aa24.54■■□□□ 1.52
MMP28-203ENST00000612672 ACADMP11310 421 aa24.54■■□□□ 1.52
MMP28-203ENST00000612672 HOXD9P28356 352 aaPredicted RBP24.54■■□□□ 1.52
MMP28-203ENST00000612672 PSEN1P49768 467 aa24.54■■□□□ 1.52
MMP28-203ENST00000612672 CAMK2GQ13555 558 aaPredicted RBP24.54■■□□□ 1.52
MMP28-203ENST00000612672 EIF4HQ15056 248 aaKnown RBP24.54■■□□□ 1.52
MMP28-203ENST00000612672 PTPRNQ16849 979 aa24.54■■□□□ 1.52
MMP28-203ENST00000612672 KMT5BQ4FZB7 885 aa24.54■■□□□ 1.52
MMP28-203ENST00000612672 ZNF394Q53GI3 561 aa24.54■■□□□ 1.52
MMP28-203ENST00000612672 RESP18Q5W5W9 173 aa24.54■■□□□ 1.52
MMP28-203ENST00000612672 CEP135Q66GS9 1140 aa24.54■■□□□ 1.52
MMP28-203ENST00000612672 SERPINA13PQ6UXR4 307 aa24.54■■□□□ 1.52
MMP28-203ENST00000612672 CPXM2Q8N436 756 aa24.54■■□□□ 1.52
MMP28-203ENST00000612672 OR2T3Q8NH03 318 aa24.54■■□□□ 1.52
MMP28-203ENST00000612672 PCDHA7Q9UN72 937 aa24.54■■□□□ 1.52
MMP28-203ENST00000612672 SHROOM3Q8TF72 1996 aa24.54■■□□□ 1.52
MMP28-203ENST00000612672 NYNRINQ9P2P1 1898 aaKnown RBP24.53■■□□□ 1.52
MMP28-203ENST00000612672 SLC12A8A0AV02 714 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 ACTN4O43707 911 aaKnown RBP24.53■■□□□ 1.52
MMP28-203ENST00000612672 C7P10643 843 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 HLA-FP30511 346 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 GCLMP48507 274 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 AFF3P51826 1226 aaKnown RBP24.53■■□□□ 1.52
MMP28-203ENST00000612672 CLDN6P56747 220 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 COG7P83436 770 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 IL9RQ01113 521 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 DDI1Q8WTU0 396 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 ZNF396Q96N95 335 aaPredicted RBP24.53■■□□□ 1.52
MMP28-203ENST00000612672 CDC6Q99741 560 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 DCLK3Q9C098 648 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 NIF3L1Q9GZT8 377 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 LHX5Q9H2C1 402 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 TMEM245Q9H330 911 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 MARCH2Q9P0N8 246 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 ANKRD6Q9Y2G4 727 aa24.53■■□□□ 1.52
MMP28-203ENST00000612672 H0Y8X5 98 aa24.52■■□□□ 1.52
MMP28-203ENST00000612672 TULP2O00295 520 aa24.52■■□□□ 1.52
MMP28-203ENST00000612672 IKBKBO14920 756 aa24.52■■□□□ 1.52
MMP28-203ENST00000612672 TSPAN3O60637 253 aa24.52■■□□□ 1.52
MMP28-203ENST00000612672 SGSHP51688 502 aa24.52■■□□□ 1.52
MMP28-203ENST00000612672 TADA2BQ86TJ2 420 aa24.52■■□□□ 1.52
MMP28-203ENST00000612672 BIRC7Q96CA5 298 aa24.52■■□□□ 1.52
MMP28-203ENST00000612672 ARID3AQ99856 593 aa24.52■■□□□ 1.52
MMP28-203ENST00000612672 CYP3A43Q9HB55 503 aa24.52■■□□□ 1.52
MMP28-203ENST00000612672 COL5A1P20908 1838 aaPredicted RBP24.51■■□□□ 1.51
MMP28-203ENST00000612672 PDXKO00764 312 aa24.51■■□□□ 1.51
MMP28-203ENST00000612672 VAMP7P51809 220 aa24.51■■□□□ 1.51
MMP28-203ENST00000612672 SMAD1Q15797 465 aaKnown RBP24.51■■□□□ 1.51
MMP28-203ENST00000612672 CCDC157Q569K6 752 aa24.51■■□□□ 1.51
MMP28-203ENST00000612672 RAB41Q5JT25 222 aa24.51■■□□□ 1.51
MMP28-203ENST00000612672 DHRS13Q6UX07 377 aa24.51■■□□□ 1.51
MMP28-203ENST00000612672 PIGZQ86VD9 579 aa24.51■■□□□ 1.51
MMP28-203ENST00000612672 WFDC5Q8TCV5 224 aa24.51■■□□□ 1.51
MMP28-203ENST00000612672 PAGE5Q96GU1 130 aa24.51■■□□□ 1.51
MMP28-203ENST00000612672 PCED1AQ9H1Q7 454 aa24.51■■□□□ 1.51
MMP28-203ENST00000612672 KNTC1P50748 2209 aa24.51■■□□□ 1.51
MMP28-203ENST00000612672 MYLKQ15746 1914 aa24.51■■□□□ 1.51
MMP28-203ENST00000612672 MGAQ8IWI9 3026 aa24.51■■□□□ 1.51
MMP28-203ENST00000612672 ATMQ13315 3056 aa24.5■■□□□ 1.51
MMP28-203ENST00000612672 TENM4Q6N022 2769 aa24.5■■□□□ 1.51
MMP28-203ENST00000612672 PTPRQQ9UMZ3 2332 aa24.5■■□□□ 1.51
MMP28-203ENST00000612672 YWHAGP61981 247 aaKnown RBP eCLIP24.5■■□□□ 1.51
MMP28-203ENST00000612672 RPS14P62263 151 aaKnown RBP24.5■■□□□ 1.51
MMP28-203ENST00000612672 ADIPOR2Q86V24 386 aa24.5■■□□□ 1.51
MMP28-203ENST00000612672 SLC4A11Q8NBS3 891 aa24.5■■□□□ 1.51
MMP28-203ENST00000612672 SEMA4DQ92854 862 aa24.5■■□□□ 1.51
MMP28-203ENST00000612672 CDK5RAP1Q96SZ6 601 aaKnown RBP24.5■■□□□ 1.51
MMP28-203ENST00000612672 SLC2A11Q9BYW1 496 aa24.5■■□□□ 1.51
MMP28-203ENST00000612672 MTG2Q9H4K7 406 aa24.5■■□□□ 1.51
MMP28-203ENST00000612672 MMRN2Q9H8L6 949 aa24.5■■□□□ 1.51
MMP28-203ENST00000612672 EXOC1Q9NV70 894 aa24.5■■□□□ 1.51
MMP28-203ENST00000612672 A0A087WV48 116 aa24.49■■□□□ 1.51
MMP28-203ENST00000612672 CBX4O00257 560 aa24.49■■□□□ 1.51
MMP28-203ENST00000612672 SEMA4FO95754 770 aa24.49■■□□□ 1.51
MMP28-203ENST00000612672 PRB1P04280 392 aa24.49■■□□□ 1.51
MMP28-203ENST00000612672 CYBBP04839 570 aa24.49■■□□□ 1.51
MMP28-203ENST00000612672 CTSKP43235 329 aa24.49■■□□□ 1.51
MMP28-203ENST00000612672 GRIA4P48058 902 aa24.49■■□□□ 1.51
MMP28-203ENST00000612672 TRIP4Q15650 581 aaPredicted RBP24.49■■□□□ 1.51
MMP28-203ENST00000612672 FNDC3BQ53EP0 1204 aaKnown RBP24.49■■□□□ 1.51
MMP28-203ENST00000612672 PRSS16Q9NQE7 514 aa24.49■■□□□ 1.51
MMP28-203ENST00000612672 TNFSF14O43557 240 aa24.48■■□□□ 1.51
MMP28-203ENST00000612672 FSBPO95073 299 aa24.48■■□□□ 1.51
MMP28-203ENST00000612672 IGHV4-34P06331 123 aa24.48■■□□□ 1.51
MMP28-203ENST00000612672 PDIA4P13667 645 aaKnown RBP24.48■■□□□ 1.51
MMP28-203ENST00000612672 RAD23BP54727 409 aa24.48■■□□□ 1.51
MMP28-203ENST00000612672 CHST9Q7L1S5 443 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms