RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 AP4E1Q9UPM8 1137 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 DCXO43602 365 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 ATP9BO43861 1147 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 P4HA1P13674 534 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 AKAP5P24588 427 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 RAPH1Q70E73 1250 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 KCNK4Q9NYG8 393 aa14.5□□□□□ -0.09
COL6A1-207ENST00000612273 APOBEC2Q9Y235 224 aaKnown RBP14.5□□□□□ -0.09
COL6A1-207ENST00000612273 OPHN1O60890 802 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 GABBR2O75899 941 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 C1QAP02745 245 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 HMGB2P26583 209 aaKnown RBP14.49□□□□□ -0.09
COL6A1-207ENST00000612273 RXRBP28702 533 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 GRIK3Q13003 919 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 TAZQ16635 292 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 SOWAHAQ2M3V2 549 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 BOLA3Q53S33 107 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 FAM167AQ96KS9 214 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 TUBB6Q9BUF5 446 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 GOLGA2P5Q9HBQ8 144 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 SNTG2Q9NY99 539 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 CACNG4Q9UBN1 327 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 TUBGCP4Q9UGJ1 667 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 AK5Q9Y6K8 562 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 ADCY6O43306 1168 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 SLC1A6P48664 564 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 ASPHQ12797 758 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 CUL3Q13618 768 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 CELF3Q5SZQ8 465 aaKnown RBP14.49□□□□□ -0.09
COL6A1-207ENST00000612273 SLC30A9Q6PML9 568 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 ZNF534Q76KX8 674 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 HPS6Q86YV9 775 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 COLGALT1Q8NBJ5 622 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 ZNF778Q96MU6 729 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 GBP5Q96PP8 586 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 PDZD7Q9H5P4 517 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 TMEM216Q9P0N5 145 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 E7ENQ6 273 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 TPH1P17752 444 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 LMO2P25791 158 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 CCR10P46092 362 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 BAG6P46379 1132 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 KCTD2Q14681 263 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 ZRSR2Q15696 482 aaKnown RBP14.49□□□□□ -0.09
COL6A1-207ENST00000612273 FETUBQ9UGM5 382 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 TNFSF13BQ9Y275 285 aa14.49□□□□□ -0.09
COL6A1-207ENST00000612273 SMAPO00193 183 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 CFLARO15519 480 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 TGDSO95455 350 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 ALDOAP04075 364 aaKnown RBP14.48□□□□□ -0.09
COL6A1-207ENST00000612273 PSMB4P28070 264 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 PDE1CQ14123 709 aaPredicted RBP14.48□□□□□ -0.09
COL6A1-207ENST00000612273 HIC1Q14526 733 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 DCAF6Q58WW2 860 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 IL31Q6EBC2 164 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 OLFML1Q6UWY5 402 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 PHTF2Q8N3S3 785 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 TUBGCP5Q96RT8 1024 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 DTLQ9NZJ0 730 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 FIS1Q9Y3D6 152 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 RPS6KL1Q9Y6S9 549 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 ADM5C9JUS6 153 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 HNRNPCL1O60812 293 aaKnown RBP14.48□□□□□ -0.09
COL6A1-207ENST00000612273 DNAJC6O75061 913 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 ACAT1P24752 427 aaKnown RBP14.48□□□□□ -0.09
COL6A1-207ENST00000612273 GRAMD1BQ3KR37 738 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 RABGAP1LQ5R372 815 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 PID1Q7Z2X4 250 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 KDELC2Q7Z4H8 507 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 RASSF3Q86WH2 238 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 DEFB107AQ8IZN7 70 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 DNAAF3Q8N9W5 541 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 FAM136AQ96C01 138 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 GBA2Q9HCG7 927 aaPredicted RBP14.48□□□□□ -0.09
COL6A1-207ENST00000612273 XPNPEP3Q9NQH7 507 aa14.48□□□□□ -0.09
COL6A1-207ENST00000612273 CAPN14A8MX76 684 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 PPP1R12AO14974 1030 aaPredicted RBP14.47□□□□□ -0.09
COL6A1-207ENST00000612273 SPAG6O75602 509 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 VAV1P15498 845 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 PROZP22891 400 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 ARRB2P32121 409 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 SERPINB5P36952 375 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 GLRBP48167 497 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 RBP5P82980 135 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 SLC6A3Q01959 620 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 KRT72Q14CN4 511 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 TEX44Q53QW1 395 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 FOXB2Q5VYV0 432 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 MARK4Q96L34 752 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 ZMAT2Q96NC0 199 aaKnown RBP14.47□□□□□ -0.09
COL6A1-207ENST00000612273 TBCBQ99426 244 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 EBF3Q9H4W6 596 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 SYBUQ9NX95 663 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 SIRPGQ9P1W8 387 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 PLA2G4CQ9UP65 541 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 NME7Q9Y5B8 376 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 AIM2O14862 343 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 TM7SF2O76062 418 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 IL18RAPO95256 599 aa14.47□□□□□ -0.09
COL6A1-207ENST00000612273 AP2B1P63010 937 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms