RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 FAM72AQ5TYM5 149 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 NADSYN1Q6IA69 706 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 PTCRAQ6ISU1 281 aaPredicted RBP12.52□□□□□ -0.41
CLK4-215ENST00000611733 FAM72DQ6L9T8 149 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 FAM72BQ86X60 149 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 FGF14Q92915 247 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 SMARCD2Q92925 531 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 MYEOVQ96EZ4 313 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 NECTIN4Q96NY8 510 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 SNRNP25Q9BV90 132 aaKnown RBP12.52□□□□□ -0.41
CLK4-215ENST00000611733 LINC00597Q9H2U6 94 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.52□□□□□ -0.41
CLK4-215ENST00000611733 ARHGEF38Q9NXL2 777 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 AGO1Q9UL18 857 aaKnown RBP12.52□□□□□ -0.41
CLK4-215ENST00000611733 FZD10Q9ULW2 581 aa12.52□□□□□ -0.41
CLK4-215ENST00000611733 SOBPA7XYQ1 873 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 C2CD4DB7Z1M9 353 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 TRDMT1O14717 391 aaKnown RBP12.51□□□□□ -0.41
CLK4-215ENST00000611733 PRPSAP2O60256 369 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 PAGE1O75459 146 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 PFKLP17858 780 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 SLC1A1P43005 524 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 GNG11P61952 73 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 NNTQ13423 1086 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 PPP2R5DQ14738 602 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 SMAD2Q15796 467 aaKnown RBP12.51□□□□□ -0.41
CLK4-215ENST00000611733 ARTNQ5T4W7 220 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 SND1Q7KZF4 910 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLK4-215ENST00000611733 PEX26Q7Z412 305 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 C14orf80Q86SX3 495 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 RSAD2Q8WXG1 361 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 HSPH1Q92598 858 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 P2RY11Q96G91 374 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 RPGRIP1Q96KN7 1286 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 SIK2Q9H0K1 926 aa12.51□□□□□ -0.41
CLK4-215ENST00000611733 GOLGA6L9A6NEM1 432 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 KIF5CO60282 957 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 CD48P09326 243 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 RING1Q06587 406 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 LLGL1Q15334 1064 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 ZNF77Q15935 545 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 MEI1Q5TIA1 1274 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 PIK3R6Q5UE93 754 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 ANKS1BQ7Z6G8 1248 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 BBS7Q8IWZ6 715 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 ALG3Q92685 438 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 PLD4Q96BZ4 506 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 KXD1Q9BQD3 176 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 AMFRQ9UKV5 643 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 HS3ST4Q9Y661 456 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 HEPACAM2A8MVW5 462 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 PI4K2BG5E9Z4 385 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 DDX3YO15523 660 aaKnown RBP12.5□□□□□ -0.41
CLK4-215ENST00000611733 SLC6A4P31645 630 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 PEX5P50542 639 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 KPNA1P52294 538 aaPredicted RBP12.5□□□□□ -0.41
CLK4-215ENST00000611733 ERMARDQ5T6L9 678 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 RFWD3Q6PCD5 774 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 Q6ZNB5 142 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 NYAP1Q6ZVC0 841 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 HTR3DQ70Z44 454 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 SYCE1Q8N0S2 351 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 CELF5Q8N6W0 485 aaKnown RBP12.5□□□□□ -0.41
CLK4-215ENST00000611733 TRIM58Q8NG06 486 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 RAPGEF5Q92565 580 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 ZFYVE19Q96K21 471 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 CALR3Q96L12 384 aaKnown RBP12.5□□□□□ -0.41
CLK4-215ENST00000611733 C16orf45Q96MC5 204 aaPredicted RBP12.5□□□□□ -0.41
CLK4-215ENST00000611733 TLR10Q9BXR5 811 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 AP4E1Q9UPM8 1137 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 SH3BP1Q9Y3L3 701 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 DOCK8Q8NF50 2099 aa12.5□□□□□ -0.41
CLK4-215ENST00000611733 ACSL4O60488 711 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 APOEP02649 317 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 WEE1P30291 646 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 HARS2P49590 506 aaKnown RBP12.49□□□□□ -0.41
CLK4-215ENST00000611733 VCPP55072 806 aaKnown RBP12.49□□□□□ -0.41
CLK4-215ENST00000611733 FAM133BQ5BKY9 247 aaKnown RBP12.49□□□□□ -0.41
CLK4-215ENST00000611733 MS4A13Q5J8X5 152 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 BRMS1LQ5PSV4 323 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 RAP1GAP2Q684P5 730 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 AADACL2Q6P093 401 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 VITQ6UXI7 678 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 OTOP3Q7RTS5 596 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 RHOT1Q8IXI2 618 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 ASIC4Q96FT7 647 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 HES6Q96HZ4 224 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 ALS2CR12Q96Q35 445 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 KCTD15Q96SI1 283 aaPredicted RBP12.49□□□□□ -0.41
CLK4-215ENST00000611733 PSMB7Q99436 277 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 PHF7Q9BWX1 381 aaPredicted RBP12.49□□□□□ -0.41
CLK4-215ENST00000611733 DHX35Q9H5Z1 703 aaKnown RBP12.49□□□□□ -0.41
CLK4-215ENST00000611733 TRPV4Q9HBA0 871 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 LIMD1Q9UGP4 676 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 LCMT1Q9UIC8 334 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 ZMYM5Q9UJ78 669 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 PCDHA3Q9Y5H8 950 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 WNT6Q9Y6F9 365 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 DENND4AQ7Z401 1863 aa12.49□□□□□ -0.41
CLK4-215ENST00000611733 TSPAN3O60637 253 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms