RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 PAICSP22234 425 aaKnown RBP13.39□□□□□ -0.27
USP6NL-205ENST00000609104 PRMT9Q6P2P2 845 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 OXCT1P55809 520 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 ERMARDQ5T6L9 678 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 N4BP2L1Q5TBK1 243 aaPredicted RBP13.39□□□□□ -0.27
USP6NL-205ENST00000609104 EMC1Q8N766 993 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 TMEM176AQ96HP8 235 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 CBWD1Q9BRT8 395 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 DGCR6LQ9BY27 220 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 SEMA6BQ9H3T3 888 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 STON1Q9Y6Q2 735 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 WDR27A2RRH5 827 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 RAG1P15918 1043 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 NRF1Q16656 503 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 RABL6Q3YEC7 729 aaPredicted RBP13.39□□□□□ -0.27
USP6NL-205ENST00000609104 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 TPH1P17752 444 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 NAMPTP43490 491 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 CNGA2Q16280 664 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 CYP2R1Q6VVX0 501 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 DHFR2Q86XF0 187 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 ELOA2Q8IYF1 753 aaPredicted RBP13.39□□□□□ -0.27
USP6NL-205ENST00000609104 CNPY3Q9BT09 278 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 SEMA4AQ9H3S1 761 aa13.39□□□□□ -0.27
USP6NL-205ENST00000609104 ZCCHC11Q5TAX3 1644 aaKnown RBP13.39□□□□□ -0.27
USP6NL-205ENST00000609104 ENO2P09104 434 aaPredicted RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 SKIV2L2P42285 1042 aaKnown RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 NDUFAF6Q330K2 333 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 ZNF571Q7Z3V5 609 aaPredicted RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 STK32CQ86UX6 486 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 ZFRQ96KR1 1074 aaKnown RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 APBA2Q99767 749 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 EMILIN2Q9BXX0 1053 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 MYRFQ9Y2G1 1151 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 TDRKHQ9Y2W6 561 aaKnown RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 ADARP55265 1226 aaKnown RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 CES3Q6UWW8 571 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 RNASE11Q8TAA1 199 aaKnown RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 CAVIN3Q969G5 261 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 OGTO15294 1046 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 TAF5Q15542 800 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 CCNG2Q16589 344 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 DGUOKQ16854 277 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 CBWD3Q5JTY5 395 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 CBWD5Q5RIA9 395 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 PAPD7Q5XG87 772 aaKnown RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 CISHQ9NSE2 258 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 FDPSP14324 419 aaKnown RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 MAPKAPK2P49137 400 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 SPANXN2Q5MJ10 180 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 POU5F2Q8N7G0 328 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 SLC20A1Q8WUM9 679 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 RAD21L1Q9H4I0 556 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 ATAD3AQ9NVI7 634 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 WASHC2DQ5SRD0 308 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 ZFYVE28Q9HCC9 887 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 GAS2O43903 313 aaKnown RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 H2AFXP16104 143 aaPredicted RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 MTSS1LQ765P7 747 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 CCDC3Q9BQI4 270 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 ENTPD7Q9NQZ7 604 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 CLOCKO15516 846 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 SLC25A27O95847 323 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 KRT6BP04259 564 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 RHOCP08134 193 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 KRT6CP48668 564 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 KLHL24Q6TFL4 600 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 ARHGAP22Q7Z5H3 698 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 GPRC5AQ8NFJ5 357 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 PARK7Q99497 189 aaKnown RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 MID1IP1Q9NPA3 183 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 PRKAG3Q9UGI9 489 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 H7C4K7 107 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 MGAT1P26572 445 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 ERO1BQ86YB8 467 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 RMND5BQ96G75 393 aaPredicted RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 OVOS2A0A0G2JMS6 1433 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 OVOS2A0A0J9YW53 1432 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 OVOS2Q6IE36 1432 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 CBX4O00257 560 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 TNNI3P19429 210 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 MAP3K14Q99558 947 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 TMEM106CQ9BVX2 250 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 ARMC7Q9H6L4 198 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 THAP1Q9NVV9 213 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 RBM22Q9NW64 420 aaKnown RBP eCLIP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 COPG2Q9UBF2 871 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 VAV3Q9UKW4 847 aa13.38□□□□□ -0.27
USP6NL-205ENST00000609104 UBQLN1Q9UMX0 589 aaKnown RBP13.38□□□□□ -0.27
USP6NL-205ENST00000609104 WARSP23381 471 aaKnown RBP13.37□□□□□ -0.27
USP6NL-205ENST00000609104 MOSPD2Q8NHP6 518 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 A1CFQ9NQ94 594 aaKnown RBP13.37□□□□□ -0.27
USP6NL-205ENST00000609104 TBC1D13Q9NVG8 400 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 TPRKBQ9Y3C4 175 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 STAG3L1P0CL83 205 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 SLC25A24Q6NUK1 477 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 KCNMB4Q86W47 210 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 DENND6AQ8IWF6 608 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 ELMO3Q96BJ8 720 aa13.37□□□□□ -0.27
USP6NL-205ENST00000609104 UGT2B28Q9BY64 529 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms