RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 ALLCQ8N6M5 410 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 TXNDC5Q8NBS9 432 aaKnown RBP17.23■□□□□ 0.35
LINC00240-203ENST00000606878 EPS8L1Q8TE68 723 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 SLC39A13Q96H72 371 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 SLC12A6Q9UHW9 1150 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 MMP17Q9ULZ9 603 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 SLC27A6Q9Y2P4 619 aa17.23■□□□□ 0.35
LINC00240-203ENST00000606878 ANTXRLA6NF34 631 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 IRAK2O43187 625 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 TEX33O43247 280 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 GRAP2O75791 330 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 SERPINC1P01008 464 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 APOEP02649 317 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 CCDC172P0C7W6 258 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 SLC2A3P11169 496 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 GABRB2P47870 512 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 DGKEP52429 567 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 CRY1Q16526 586 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 ZSCAN23Q3MJ62 389 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 OLFML1Q6UWY5 402 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 SLC26A9Q7LBE3 791 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 TAC4Q86UU9 113 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 WDR5BQ86VZ2 330 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 ZNF513Q8N8E2 541 aaPredicted RBP17.22■□□□□ 0.35
LINC00240-203ENST00000606878 IL17RCQ8NAC3 791 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 ZNF397Q8NF99 534 aaPredicted RBP17.22■□□□□ 0.35
LINC00240-203ENST00000606878 TSTD1Q8NFU3 115 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 CPA5Q8WXQ8 436 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 PIWIL1Q96J94 861 aaKnown RBP17.22■□□□□ 0.35
LINC00240-203ENST00000606878 FCRL2Q96LA5 508 aaPredicted RBP17.22■□□□□ 0.35
LINC00240-203ENST00000606878 SLC2A13Q96QE2 648 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 CBX8Q9HC52 389 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC00240-203ENST00000606878 NOCTQ9UK39 431 aaKnown RBP17.22■□□□□ 0.35
LINC00240-203ENST00000606878 RAB23Q9ULC3 237 aa17.22■□□□□ 0.35
LINC00240-203ENST00000606878 GOLGA6L7A0A1B0GV03 622 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 GOLGA6L19H0YKK7 550 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 HRO43593 1189 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 TIMM44O43615 452 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 ALDH1A2O94788 518 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 HOXC13P31276 330 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 NOS2P35228 1153 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 PXNP49023 591 aaPredicted RBP17.21■□□□□ 0.35
LINC00240-203ENST00000606878 RNASE9P60153 205 aaKnown RBP17.21■□□□□ 0.35
LINC00240-203ENST00000606878 ARID5AQ03989 594 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 SIM2Q14190 667 aaPredicted RBP17.21■□□□□ 0.35
LINC00240-203ENST00000606878 E2F5Q15329 346 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 ZC3H12AQ5D1E8 599 aaKnown RBP17.21■□□□□ 0.35
LINC00240-203ENST00000606878 MPP7Q5T2T1 576 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 NAA35Q5VZE5 725 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 TRIM72Q6ZMU5 477 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 SUMF1Q8NBK3 374 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 RNF34Q969K3 372 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 P2RY11Q96G91 374 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 HHIPQ96QV1 700 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 EPC1Q9H2F5 836 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 FAM204AQ9H8W3 233 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 RRN3Q9NYV6 651 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 EBF1Q9UH73 591 aa17.21■□□□□ 0.35
LINC00240-203ENST00000606878 A0A1W2PQC6 194 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 PRRT4C9JH25 899 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 SGK1O00141 431 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 GFRA2O00451 464 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 AXIN1O15169 862 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 IGLV3-25P01717 112 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 CHRNB2P17787 502 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 NTSR1P30989 418 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 SCNN1AP37088 669 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 MATKP42679 507 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 NR1I3Q14994 352 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 PIK3R6Q5UE93 754 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 RFWD3Q6PCD5 774 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 LUZP1Q86V48 1076 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 CHPFQ8IZ52 775 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 ATP6V0D2Q8N8Y2 350 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 SLC20A1Q8WUM9 679 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 UCMAQ8WVF2 138 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 NAP1L5Q96NT1 182 aaPredicted RBP17.2■□□□□ 0.34
LINC00240-203ENST00000606878 POLMQ9NP87 494 aaPredicted RBP17.2■□□□□ 0.34
LINC00240-203ENST00000606878 TMEM51Q9NW97 253 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 DDIT4Q9NX09 232 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.2■□□□□ 0.34
LINC00240-203ENST00000606878 CLEC4EQ9ULY5 219 aa17.2■□□□□ 0.34
LINC00240-203ENST00000606878 MYO18AQ92614 2054 aaKnown RBP17.19■□□□□ 0.34
LINC00240-203ENST00000606878 A0A1B0GTH6 734 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 TYW5A2RUC4 315 aaKnown RBP17.19■□□□□ 0.34
LINC00240-203ENST00000606878 ZBTB24O43167 697 aaPredicted RBP17.19■□□□□ 0.34
LINC00240-203ENST00000606878 TBL1XO60907 577 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 MOCS2O96007 188 aaPredicted RBP17.19■□□□□ 0.34
LINC00240-203ENST00000606878 CYP1A1P04798 512 aaPredicted RBP17.19■□□□□ 0.34
LINC00240-203ENST00000606878 CHRM1P11229 460 aaPredicted RBP17.19■□□□□ 0.34
LINC00240-203ENST00000606878 FERP16591 822 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 ABCB4P21439 1286 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 CCR1P32246 355 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 NOMO3P69849 1222 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 FMO1Q01740 532 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 MTA1Q13330 715 aa17.19■□□□□ 0.34
LINC00240-203ENST00000606878 EIF4EBP2Q13542 120 aaPredicted RBP17.19■□□□□ 0.34
LINC00240-203ENST00000606878 FAM133BQ5BKY9 247 aaKnown RBP17.19■□□□□ 0.34
LINC00240-203ENST00000606878 TMEM92Q6UXU6 159 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms