RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 PEAR1Q5VY43 1037 aaPredicted RBP13.95□□□□□ -0.18
CTSA-213ENST00000606782 BSPRYQ5W0U4 402 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 SMYD5Q6GMV2 418 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 TCEAL6Q6IPX3 200 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 TRIM65Q6PJ69 517 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 SARM1Q6SZW1 724 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 RSRC2Q7L4I2 434 aaKnown RBP13.95□□□□□ -0.18
CTSA-213ENST00000606782 FRMD1Q8N878 549 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 RBBP8NLQ8NC74 664 aaPredicted RBP13.95□□□□□ -0.18
CTSA-213ENST00000606782 IPO4Q8TEX9 1081 aaKnown RBP13.95□□□□□ -0.18
CTSA-213ENST00000606782 TFAP2BQ92481 460 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 TCEAL3Q969E4 200 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 PIWIL1Q96J94 861 aaKnown RBP13.95□□□□□ -0.18
CTSA-213ENST00000606782 ZSWIM1Q9BR11 485 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 SLC2A11Q9BYW1 496 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 LRRC4Q9HBW1 653 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 PLCB1Q9NQ66 1216 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 IFNKQ9P0W0 207 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 BCCIPQ9P287 314 aaKnown RBP eCLIP13.95□□□□□ -0.18
CTSA-213ENST00000606782 CNTN6Q9UQ52 1028 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 SIK3Q9Y2K2 1263 aa13.95□□□□□ -0.18
CTSA-213ENST00000606782 HBS1LQ9Y450 684 aaKnown RBP13.95□□□□□ -0.18
CTSA-213ENST00000606782 A0A1W2PQC6 194 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 SLC12A8A0AV02 714 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 YJEFN3A6XGL0 299 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 E7ENQ6 273 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 RNF225M0QZC1 329 aaPredicted RBP13.94□□□□□ -0.18
CTSA-213ENST00000606782 KHNYNO15037 678 aaKnown RBP13.94□□□□□ -0.18
CTSA-213ENST00000606782 AP5Z1O43299 807 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 HOXD12P35452 270 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 PBX1P40424 430 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 RPL34P49207 117 aaKnown RBP13.94□□□□□ -0.18
CTSA-213ENST00000606782 DHPSP49366 369 aaPredicted RBP13.94□□□□□ -0.18
CTSA-213ENST00000606782 ZNF132P52740 706 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 ADIGQ0VDE8 80 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 STILQ15468 1287 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 KLHDC7AQ5VTJ3 777 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 RNF43Q68DV7 783 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 SDE2Q6IQ49 451 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 KIAA1211LQ6NV74 962 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 MSANTD2Q6P1R3 559 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 TMEM270Q6UE05 265 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 CYP2U1Q7Z449 544 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 METTL3Q86U44 580 aaKnown RBP13.94□□□□□ -0.18
CTSA-213ENST00000606782 SYT12Q8IV01 421 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 DENND1CQ8IV53 801 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 CHPFQ8IZ52 775 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 UBA3Q8TBC4 463 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 NDRG1Q92597 394 aaKnown RBP13.94□□□□□ -0.18
CTSA-213ENST00000606782 FAM81BQ96LP2 452 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 ABCC13Q9NSE7 274 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 PLK2Q9NYY3 685 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 THAP10Q9P2Z0 257 aaPredicted RBP13.94□□□□□ -0.18
CTSA-213ENST00000606782 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.94□□□□□ -0.18
CTSA-213ENST00000606782 TNRC6BQ9UPQ9 1833 aaKnown RBP13.94□□□□□ -0.18
CTSA-213ENST00000606782 CEP295Q9C0D2 2601 aa13.94□□□□□ -0.18
CTSA-213ENST00000606782 CACNA1BQ00975 2339 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 ASCC3Q8N3C0 2202 aaKnown RBP13.93□□□□□ -0.18
CTSA-213ENST00000606782 CDX4O14627 284 aaPredicted RBP13.93□□□□□ -0.18
CTSA-213ENST00000606782 MAP3K13O43283 966 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 ZNF217O75362 1048 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 LATS1O95835 1130 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 HMBSP08397 361 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 C7P10643 843 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 WASP42768 502 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 PTGER3P43115 390 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 DAOAP59103 153 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 E2F5Q15329 346 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 SYCP1Q15431 976 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 PMF1Q6P1K2 205 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 SLC36A4Q6YBV0 504 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 ENOSF1Q7L5Y1 443 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 FMNL3Q8IVF7 1028 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 ARHGEF19Q8IW93 802 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 PGBD3Q8N328 593 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 PPM1KQ8N3J5 372 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 IRGQQ8WZA9 623 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 KAT5Q92993 513 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 HSFY1Q96LI6 401 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 EDEM2Q9BV94 578 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 NAA15Q9BXJ9 866 aaKnown RBP13.93□□□□□ -0.18
CTSA-213ENST00000606782 IRX2Q9BZI1 471 aaPredicted RBP13.93□□□□□ -0.18
CTSA-213ENST00000606782 XPO4Q9C0E2 1151 aaKnown RBP13.93□□□□□ -0.18
CTSA-213ENST00000606782 UBE2TQ9NPD8 197 aaPredicted RBP13.93□□□□□ -0.18
CTSA-213ENST00000606782 CALCOCO1Q9P1Z2 691 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 APEX2Q9UBZ4 518 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 PILRBQ9UKJ0 227 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 PCDHB4Q9Y5E5 795 aa13.93□□□□□ -0.18
CTSA-213ENST00000606782 CACNA1EQ15878 2313 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 IGHV1OR15-9A0A0B4J2B8 117 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 PATE3B3GLJ2 98 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 ZBTB24O43167 697 aaPredicted RBP13.92□□□□□ -0.18
CTSA-213ENST00000606782 CBFA2T2O43439 604 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 TIMM44O43615 452 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 IGLV3-27P01718 113 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 CYBBP04839 570 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 NDUFV2P19404 249 aa13.92□□□□□ -0.18
CTSA-213ENST00000606782 HARS2P49590 506 aaKnown RBP13.92□□□□□ -0.18
CTSA-213ENST00000606782 KLK7P49862 253 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms